Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP1BQ7LBR1 FP700111.2-201ENST00000619190 1892 ntBASIC18.14■□□□□ 0.49
CHMP1BQ7LBR1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP1BQ7LBR1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP1BQ7LBR1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.13■□□□□ 0.49
CHMP1BQ7LBR1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.13■□□□□ 0.49
CHMP1BQ7LBR1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CHMP1BQ7LBR1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
CHMP1BQ7LBR1 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP1BQ7LBR1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP1BQ7LBR1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP1BQ7LBR1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP1BQ7LBR1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.13■□□□□ 0.49
CHMP1BQ7LBR1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP1BQ7LBR1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CHMP1BQ7LBR1 UNC93B4-201ENST00000505679 747 ntBASIC18.13■□□□□ 0.49
CHMP1BQ7LBR1 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
CHMP1BQ7LBR1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.13■□□□□ 0.49
CHMP1BQ7LBR1 AC006058.3-201ENST00000606217 1069 ntBASIC18.13■□□□□ 0.49
CHMP1BQ7LBR1 ITM2C-210ENST00000620962 501 ntBASIC18.13■□□□□ 0.49
CHMP1BQ7LBR1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
CHMP1BQ7LBR1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP1BQ7LBR1 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP1BQ7LBR1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP1BQ7LBR1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP1BQ7LBR1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP1BQ7LBR1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP1BQ7LBR1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP1BQ7LBR1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP1BQ7LBR1 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP1BQ7LBR1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP1BQ7LBR1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP1BQ7LBR1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP1BQ7LBR1 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP1BQ7LBR1 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP1BQ7LBR1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.12■□□□□ 0.49
CHMP1BQ7LBR1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CHMP1BQ7LBR1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CHMP1BQ7LBR1 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.12■□□□□ 0.49
CHMP1BQ7LBR1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP1BQ7LBR1 SOX15-203ENST00000570788 1093 ntBASIC18.12■□□□□ 0.49
CHMP1BQ7LBR1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.12■□□□□ 0.49
CHMP1BQ7LBR1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP1BQ7LBR1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.12■□□□□ 0.49
CHMP1BQ7LBR1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.12■□□□□ 0.49
CHMP1BQ7LBR1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP1BQ7LBR1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP1BQ7LBR1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.12■□□□□ 0.49
CHMP1BQ7LBR1 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP1BQ7LBR1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.12■□□□□ 0.49
CHMP1BQ7LBR1 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP1BQ7LBR1 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
CHMP1BQ7LBR1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP1BQ7LBR1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP1BQ7LBR1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP1BQ7LBR1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CHMP1BQ7LBR1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CHMP1BQ7LBR1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP1BQ7LBR1 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP1BQ7LBR1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP1BQ7LBR1 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CHMP1BQ7LBR1 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.11■□□□□ 0.49
CHMP1BQ7LBR1 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.11■□□□□ 0.49
CHMP1BQ7LBR1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.11■□□□□ 0.49
CHMP1BQ7LBR1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.11■□□□□ 0.49
CHMP1BQ7LBR1 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.11■□□□□ 0.49
CHMP1BQ7LBR1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CHMP1BQ7LBR1 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP1BQ7LBR1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CHMP1BQ7LBR1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP1BQ7LBR1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP1BQ7LBR1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.11■□□□□ 0.49
CHMP1BQ7LBR1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.11■□□□□ 0.49
CHMP1BQ7LBR1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP1BQ7LBR1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP1BQ7LBR1 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP1BQ7LBR1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP1BQ7LBR1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.1■□□□□ 0.49
CHMP1BQ7LBR1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CHMP1BQ7LBR1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.1■□□□□ 0.49
CHMP1BQ7LBR1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP1BQ7LBR1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.1■□□□□ 0.49
CHMP1BQ7LBR1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP1BQ7LBR1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP1BQ7LBR1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP1BQ7LBR1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CHMP1BQ7LBR1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CHMP1BQ7LBR1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP1BQ7LBR1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.1■□□□□ 0.49
CHMP1BQ7LBR1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CHMP1BQ7LBR1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CHMP1BQ7LBR1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP1BQ7LBR1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP1BQ7LBR1 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP1BQ7LBR1 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP1BQ7LBR1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP1BQ7LBR1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.1■□□□□ 0.49
CHMP1BQ7LBR1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP1BQ7LBR1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP1BQ7LBR1 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms