Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC149Q6ZUS6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC149Q6ZUS6 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC149Q6ZUS6 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CCDC149Q6ZUS6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC149Q6ZUS6 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC149Q6ZUS6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC149Q6ZUS6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC149Q6ZUS6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC149Q6ZUS6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC149Q6ZUS6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC149Q6ZUS6 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC149Q6ZUS6 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC149Q6ZUS6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC149Q6ZUS6 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC149Q6ZUS6 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.75■□□□□ 0.91
CCDC149Q6ZUS6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC149Q6ZUS6 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.75■□□□□ 0.91
CCDC149Q6ZUS6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC149Q6ZUS6 C2orf69P3-201ENST00000565542 1120 ntBASIC20.75■□□□□ 0.91
CCDC149Q6ZUS6 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC149Q6ZUS6 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC149Q6ZUS6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC149Q6ZUS6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC149Q6ZUS6 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC149Q6ZUS6 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC149Q6ZUS6 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC149Q6ZUS6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC149Q6ZUS6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC149Q6ZUS6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC149Q6ZUS6 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CCDC149Q6ZUS6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC149Q6ZUS6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC149Q6ZUS6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CCDC149Q6ZUS6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CCDC149Q6ZUS6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC149Q6ZUS6 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC149Q6ZUS6 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC149Q6ZUS6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC149Q6ZUS6 AC104076.2-201ENST00000448912 469 ntBASIC20.74■□□□□ 0.91
CCDC149Q6ZUS6 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CCDC149Q6ZUS6 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC149Q6ZUS6 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC149Q6ZUS6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.74■□□□□ 0.91
CCDC149Q6ZUS6 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC149Q6ZUS6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CCDC149Q6ZUS6 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.74■□□□□ 0.91
CCDC149Q6ZUS6 AC131212.4-201ENST00000623606 975 ntBASIC20.74■□□□□ 0.91
CCDC149Q6ZUS6 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC149Q6ZUS6 AC026310.3-201ENST00000625186 2373 ntBASIC20.74■□□□□ 0.91
CCDC149Q6ZUS6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC149Q6ZUS6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC149Q6ZUS6 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC149Q6ZUS6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC149Q6ZUS6 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CCDC149Q6ZUS6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CCDC149Q6ZUS6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC149Q6ZUS6 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC149Q6ZUS6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC149Q6ZUS6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC149Q6ZUS6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC149Q6ZUS6 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CCDC149Q6ZUS6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC149Q6ZUS6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
CCDC149Q6ZUS6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
CCDC149Q6ZUS6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC149Q6ZUS6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC149Q6ZUS6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC149Q6ZUS6 DGCR10-201ENST00000609839 495 ntBASIC20.73■□□□□ 0.91
CCDC149Q6ZUS6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC149Q6ZUS6 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC149Q6ZUS6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC149Q6ZUS6 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC149Q6ZUS6 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC149Q6ZUS6 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.73■□□□□ 0.91
CCDC149Q6ZUS6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CCDC149Q6ZUS6 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC149Q6ZUS6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC149Q6ZUS6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC149Q6ZUS6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC149Q6ZUS6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC149Q6ZUS6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC149Q6ZUS6 AC010203.1-204ENST00000548782 407 ntBASIC20.72■□□□□ 0.91
CCDC149Q6ZUS6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CCDC149Q6ZUS6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
CCDC149Q6ZUS6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC149Q6ZUS6 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC149Q6ZUS6 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC149Q6ZUS6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC149Q6ZUS6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC149Q6ZUS6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC149Q6ZUS6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC149Q6ZUS6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC149Q6ZUS6 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.71■□□□□ 0.91
CCDC149Q6ZUS6 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC149Q6ZUS6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC149Q6ZUS6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC149Q6ZUS6 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC149Q6ZUS6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC149Q6ZUS6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms