Protein–RNA interactions for Protein: Q6YHK3

CD109, CD109 antigen, humanhuman

Predictions only

Length 1,445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD109Q6YHK3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CD109Q6YHK3 SPDYE13P-201ENST00000445314 798 ntBASIC30.19■■■□□ 2.42
CD109Q6YHK3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CD109Q6YHK3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC30.19■■■□□ 2.42
CD109Q6YHK3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC30.19■■■□□ 2.42
CD109Q6YHK3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CD109Q6YHK3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CD109Q6YHK3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC30.19■■■□□ 2.42
CD109Q6YHK3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CD109Q6YHK3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC30.18■■■□□ 2.42
CD109Q6YHK3 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
CD109Q6YHK3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CD109Q6YHK3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC30.18■■■□□ 2.42
CD109Q6YHK3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC30.18■■■□□ 2.42
CD109Q6YHK3 AP003041.3-201ENST00000527151 707 ntBASIC30.18■■■□□ 2.42
CD109Q6YHK3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC30.18■■■□□ 2.42
CD109Q6YHK3 AC092119.3-201ENST00000612618 583 ntBASIC30.18■■■□□ 2.42
CD109Q6YHK3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CD109Q6YHK3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CD109Q6YHK3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
CD109Q6YHK3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC30.18■■■□□ 2.42
CD109Q6YHK3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
CD109Q6YHK3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC30.17■■■□□ 2.42
CD109Q6YHK3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CD109Q6YHK3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
CD109Q6YHK3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC30.17■■■□□ 2.42
CD109Q6YHK3 KRT8P45-201ENST00000414328 1447 ntBASIC30.17■■■□□ 2.42
CD109Q6YHK3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC30.17■■■□□ 2.42
CD109Q6YHK3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CD109Q6YHK3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CD109Q6YHK3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC30.17■■■□□ 2.42
CD109Q6YHK3 AC242852.2-201ENST00000615738 1807 ntBASIC30.17■■■□□ 2.42
CD109Q6YHK3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC30.17■■■□□ 2.42
CD109Q6YHK3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC30.17■■■□□ 2.42
CD109Q6YHK3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC30.16■■■□□ 2.42
CD109Q6YHK3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CD109Q6YHK3 STARP1-201ENST00000397973 869 ntBASIC30.16■■■□□ 2.42
CD109Q6YHK3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC30.16■■■□□ 2.42
CD109Q6YHK3 AC111152.3-201ENST00000569699 673 ntBASIC30.16■■■□□ 2.42
CD109Q6YHK3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC30.16■■■□□ 2.42
CD109Q6YHK3 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
CD109Q6YHK3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CD109Q6YHK3 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CD109Q6YHK3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CD109Q6YHK3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CD109Q6YHK3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
CD109Q6YHK3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC30.15■■■□□ 2.42
CD109Q6YHK3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
CD109Q6YHK3 PRELID1P1-202ENST00000567272 903 ntBASIC30.15■■■□□ 2.42
CD109Q6YHK3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC30.15■■■□□ 2.42
CD109Q6YHK3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
CD109Q6YHK3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CD109Q6YHK3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC30.15■■■□□ 2.42
CD109Q6YHK3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC30.15■■■□□ 2.42
CD109Q6YHK3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
CD109Q6YHK3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
CD109Q6YHK3 AC004870.1-201ENST00000315132 882 ntBASIC30.14■■■□□ 2.42
CD109Q6YHK3 AL845331.1-201ENST00000424978 1190 ntBASIC30.14■■■□□ 2.42
CD109Q6YHK3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC30.14■■■□□ 2.42
CD109Q6YHK3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CD109Q6YHK3 LINC01311-201ENST00000565162 1445 ntBASIC30.14■■■□□ 2.42
CD109Q6YHK3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CD109Q6YHK3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC30.14■■■□□ 2.41
CD109Q6YHK3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC30.13■■■□□ 2.41
CD109Q6YHK3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC30.13■■■□□ 2.41
CD109Q6YHK3 MIR3652-201ENST00000579335 131 ntBASIC30.13■■■□□ 2.41
CD109Q6YHK3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CD109Q6YHK3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC30.13■■■□□ 2.41
CD109Q6YHK3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC30.13■■■□□ 2.41
CD109Q6YHK3 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
CD109Q6YHK3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CD109Q6YHK3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
CD109Q6YHK3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
CD109Q6YHK3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CD109Q6YHK3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC30.13■■■□□ 2.41
CD109Q6YHK3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CD109Q6YHK3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC30.13■■■□□ 2.41
CD109Q6YHK3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
CD109Q6YHK3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CD109Q6YHK3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC30.12■■■□□ 2.41
CD109Q6YHK3 SPDYE15P-201ENST00000424157 909 ntBASIC30.12■■■□□ 2.41
CD109Q6YHK3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC30.12■■■□□ 2.41
CD109Q6YHK3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC30.12■■■□□ 2.41
CD109Q6YHK3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC30.12■■■□□ 2.41
CD109Q6YHK3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC30.12■■■□□ 2.41
CD109Q6YHK3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CD109Q6YHK3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CD109Q6YHK3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
CD109Q6YHK3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CD109Q6YHK3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CD109Q6YHK3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CD109Q6YHK3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CD109Q6YHK3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC30.11■■■□□ 2.41
CD109Q6YHK3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC30.11■■■□□ 2.41
CD109Q6YHK3 AP000523.1-201ENST00000398242 1049 ntBASIC30.11■■■□□ 2.41
CD109Q6YHK3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
CD109Q6YHK3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC30.11■■■□□ 2.41
CD109Q6YHK3 C9orf163-202ENST00000624034 2573 ntBASIC30.1■■■□□ 2.41
CD109Q6YHK3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC30.1■■■□□ 2.41
CD109Q6YHK3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms