Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PACS1Q6VY07 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.89■□□□□ 0.77
PACS1Q6VY07 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.89■□□□□ 0.77
PACS1Q6VY07 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.89■□□□□ 0.77
PACS1Q6VY07 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PACS1Q6VY07 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.89■□□□□ 0.77
PACS1Q6VY07 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.89■□□□□ 0.77
PACS1Q6VY07 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.89■□□□□ 0.77
PACS1Q6VY07 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
PACS1Q6VY07 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PACS1Q6VY07 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PACS1Q6VY07 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.89■□□□□ 0.77
PACS1Q6VY07 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.89■□□□□ 0.77
PACS1Q6VY07 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PACS1Q6VY07 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PACS1Q6VY07 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.88■□□□□ 0.77
PACS1Q6VY07 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.88■□□□□ 0.77
PACS1Q6VY07 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PACS1Q6VY07 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PACS1Q6VY07 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PACS1Q6VY07 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PACS1Q6VY07 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PACS1Q6VY07 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PACS1Q6VY07 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PACS1Q6VY07 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PACS1Q6VY07 KRT8P20-201ENST00000423953 1409 ntBASIC19.88■□□□□ 0.77
PACS1Q6VY07 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PACS1Q6VY07 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PACS1Q6VY07 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PACS1Q6VY07 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PACS1Q6VY07 AC023632.3-201ENST00000521633 145 ntBASIC19.88■□□□□ 0.77
PACS1Q6VY07 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PACS1Q6VY07 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.88■□□□□ 0.77
PACS1Q6VY07 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PACS1Q6VY07 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PACS1Q6VY07 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.88■□□□□ 0.77
PACS1Q6VY07 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.88■□□□□ 0.77
PACS1Q6VY07 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PACS1Q6VY07 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PACS1Q6VY07 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.87■□□□□ 0.77
PACS1Q6VY07 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PACS1Q6VY07 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PACS1Q6VY07 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PACS1Q6VY07 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PACS1Q6VY07 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PACS1Q6VY07 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
PACS1Q6VY07 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PACS1Q6VY07 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.87■□□□□ 0.77
PACS1Q6VY07 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PACS1Q6VY07 AC069152.1-201ENST00000438030 544 ntBASIC19.87■□□□□ 0.77
PACS1Q6VY07 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.87■□□□□ 0.77
PACS1Q6VY07 AC098934.4-201ENST00000564127 592 ntBASIC19.87■□□□□ 0.77
PACS1Q6VY07 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PACS1Q6VY07 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PACS1Q6VY07 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PACS1Q6VY07 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.87■□□□□ 0.77
PACS1Q6VY07 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PACS1Q6VY07 AP000974.1-201ENST00000623909 2387 ntBASIC19.86■□□□□ 0.77
PACS1Q6VY07 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.86■□□□□ 0.77
PACS1Q6VY07 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PACS1Q6VY07 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PACS1Q6VY07 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PACS1Q6VY07 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.86■□□□□ 0.77
PACS1Q6VY07 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.86■□□□□ 0.77
PACS1Q6VY07 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.86■□□□□ 0.77
PACS1Q6VY07 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.86■□□□□ 0.77
PACS1Q6VY07 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.86■□□□□ 0.77
PACS1Q6VY07 AC133041.1-202ENST00000642053 222 ntBASIC19.86■□□□□ 0.77
PACS1Q6VY07 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.86■□□□□ 0.77
PACS1Q6VY07 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
PACS1Q6VY07 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PACS1Q6VY07 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PACS1Q6VY07 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PACS1Q6VY07 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PACS1Q6VY07 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PACS1Q6VY07 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.85■□□□□ 0.77
PACS1Q6VY07 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PACS1Q6VY07 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.85■□□□□ 0.77
PACS1Q6VY07 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PACS1Q6VY07 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PACS1Q6VY07 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.85■□□□□ 0.77
PACS1Q6VY07 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PACS1Q6VY07 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
PACS1Q6VY07 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.85■□□□□ 0.77
PACS1Q6VY07 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.85■□□□□ 0.77
PACS1Q6VY07 AC097658.1-201ENST00000475555 843 ntBASIC19.85■□□□□ 0.77
PACS1Q6VY07 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PACS1Q6VY07 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.85■□□□□ 0.77
PACS1Q6VY07 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.85■□□□□ 0.77
PACS1Q6VY07 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
PACS1Q6VY07 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.85■□□□□ 0.77
PACS1Q6VY07 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PACS1Q6VY07 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.85■□□□□ 0.77
PACS1Q6VY07 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.85■□□□□ 0.77
PACS1Q6VY07 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
PACS1Q6VY07 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PACS1Q6VY07 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PACS1Q6VY07 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.84■□□□□ 0.77
PACS1Q6VY07 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PACS1Q6VY07 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms