Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.08■□□□□ 0.8
CASC4Q6P4E1 TREX1-205ENST00000625293 1783 ntBASIC20.08■□□□□ 0.8
CASC4Q6P4E1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CASC4Q6P4E1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CASC4Q6P4E1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CASC4Q6P4E1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CASC4Q6P4E1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.08■□□□□ 0.8
CASC4Q6P4E1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.07■□□□□ 0.8
CASC4Q6P4E1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CASC4Q6P4E1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CASC4Q6P4E1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CASC4Q6P4E1 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CASC4Q6P4E1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CASC4Q6P4E1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CASC4Q6P4E1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.07■□□□□ 0.8
CASC4Q6P4E1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CASC4Q6P4E1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.07■□□□□ 0.8
CASC4Q6P4E1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
CASC4Q6P4E1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CASC4Q6P4E1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CASC4Q6P4E1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.07■□□□□ 0.8
CASC4Q6P4E1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.07■□□□□ 0.8
CASC4Q6P4E1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CASC4Q6P4E1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CASC4Q6P4E1 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CASC4Q6P4E1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CASC4Q6P4E1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CASC4Q6P4E1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CASC4Q6P4E1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CASC4Q6P4E1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CASC4Q6P4E1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CASC4Q6P4E1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CASC4Q6P4E1 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CASC4Q6P4E1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CASC4Q6P4E1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.06■□□□□ 0.8
CASC4Q6P4E1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CASC4Q6P4E1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CASC4Q6P4E1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CASC4Q6P4E1 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CASC4Q6P4E1 LSM12P1-201ENST00000411836 588 ntBASIC20.06■□□□□ 0.8
CASC4Q6P4E1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CASC4Q6P4E1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CASC4Q6P4E1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.06■□□□□ 0.8
CASC4Q6P4E1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.06■□□□□ 0.8
CASC4Q6P4E1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CASC4Q6P4E1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.06■□□□□ 0.8
CASC4Q6P4E1 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CASC4Q6P4E1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CASC4Q6P4E1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CASC4Q6P4E1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CASC4Q6P4E1 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.06■□□□□ 0.8
CASC4Q6P4E1 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CASC4Q6P4E1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.06■□□□□ 0.8
CASC4Q6P4E1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CASC4Q6P4E1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CASC4Q6P4E1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CASC4Q6P4E1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.06■□□□□ 0.8
CASC4Q6P4E1 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CASC4Q6P4E1 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CASC4Q6P4E1 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CASC4Q6P4E1 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CASC4Q6P4E1 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.05■□□□□ 0.8
CASC4Q6P4E1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CASC4Q6P4E1 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CASC4Q6P4E1 AL512625.2-201ENST00000417533 625 ntBASIC20.05■□□□□ 0.8
CASC4Q6P4E1 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CASC4Q6P4E1 AC080038.1-201ENST00000611274 1154 ntBASIC20.05■□□□□ 0.8
CASC4Q6P4E1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CASC4Q6P4E1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.05■□□□□ 0.8
CASC4Q6P4E1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CASC4Q6P4E1 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CASC4Q6P4E1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.05■□□□□ 0.8
CASC4Q6P4E1 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CASC4Q6P4E1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.04■□□□□ 0.8
CASC4Q6P4E1 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASC4Q6P4E1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.04■□□□□ 0.8
CASC4Q6P4E1 AP001271.2-201ENST00000624018 1556 ntBASIC20.04■□□□□ 0.8
CASC4Q6P4E1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASC4Q6P4E1 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CASC4Q6P4E1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CASC4Q6P4E1 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CASC4Q6P4E1 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.04■□□□□ 0.8
CASC4Q6P4E1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.04■□□□□ 0.8
CASC4Q6P4E1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CASC4Q6P4E1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.04■□□□□ 0.8
CASC4Q6P4E1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.04■□□□□ 0.8
CASC4Q6P4E1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.04■□□□□ 0.8
CASC4Q6P4E1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.04■□□□□ 0.8
CASC4Q6P4E1 IKBKGP1-201ENST00000612193 1073 ntBASIC20.04■□□□□ 0.8
CASC4Q6P4E1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASC4Q6P4E1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.04■□□□□ 0.8
CASC4Q6P4E1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.04■□□□□ 0.8
CASC4Q6P4E1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.04■□□□□ 0.8
CASC4Q6P4E1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CASC4Q6P4E1 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASC4Q6P4E1 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASC4Q6P4E1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CASC4Q6P4E1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASC4Q6P4E1 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASC4Q6P4E1 AC093484.2-201ENST00000580996 2166 ntBASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms