Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SWSAP1Q6NVH7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC22■■□□□ 1.11
SWSAP1Q6NVH7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC22■■□□□ 1.11
SWSAP1Q6NVH7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC22■■□□□ 1.11
SWSAP1Q6NVH7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC22■■□□□ 1.11
SWSAP1Q6NVH7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
SWSAP1Q6NVH7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
SWSAP1Q6NVH7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22■■□□□ 1.11
SWSAP1Q6NVH7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
SWSAP1Q6NVH7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SWSAP1Q6NVH7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SWSAP1Q6NVH7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SWSAP1Q6NVH7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.99■■□□□ 1.11
SWSAP1Q6NVH7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
SWSAP1Q6NVH7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SWSAP1Q6NVH7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SWSAP1Q6NVH7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SWSAP1Q6NVH7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
SWSAP1Q6NVH7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SWSAP1Q6NVH7 TUBB8P6-201ENST00000436895 1288 ntBASIC21.99■■□□□ 1.11
SWSAP1Q6NVH7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SWSAP1Q6NVH7 AC026471.5-201ENST00000615068 467 ntBASIC21.99■■□□□ 1.11
SWSAP1Q6NVH7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SWSAP1Q6NVH7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SWSAP1Q6NVH7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
SWSAP1Q6NVH7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
SWSAP1Q6NVH7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.98■■□□□ 1.11
SWSAP1Q6NVH7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
SWSAP1Q6NVH7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SWSAP1Q6NVH7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SWSAP1Q6NVH7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SWSAP1Q6NVH7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.98■■□□□ 1.11
SWSAP1Q6NVH7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SWSAP1Q6NVH7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.98■■□□□ 1.11
SWSAP1Q6NVH7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.98■■□□□ 1.11
SWSAP1Q6NVH7 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.98■■□□□ 1.11
SWSAP1Q6NVH7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SWSAP1Q6NVH7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.98■■□□□ 1.11
SWSAP1Q6NVH7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.98■■□□□ 1.11
SWSAP1Q6NVH7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SWSAP1Q6NVH7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SWSAP1Q6NVH7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
SWSAP1Q6NVH7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SWSAP1Q6NVH7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SWSAP1Q6NVH7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
SWSAP1Q6NVH7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
SWSAP1Q6NVH7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.97■■□□□ 1.11
SWSAP1Q6NVH7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.97■■□□□ 1.11
SWSAP1Q6NVH7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.97■■□□□ 1.11
SWSAP1Q6NVH7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SWSAP1Q6NVH7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SWSAP1Q6NVH7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.97■■□□□ 1.11
SWSAP1Q6NVH7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SWSAP1Q6NVH7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SWSAP1Q6NVH7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SWSAP1Q6NVH7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.97■■□□□ 1.11
SWSAP1Q6NVH7 NIFKP9-201ENST00000419265 221 ntBASIC21.97■■□□□ 1.11
SWSAP1Q6NVH7 AL355355.2-201ENST00000442321 338 ntBASIC21.97■■□□□ 1.11
SWSAP1Q6NVH7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
SWSAP1Q6NVH7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.97■■□□□ 1.11
SWSAP1Q6NVH7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.97■■□□□ 1.11
SWSAP1Q6NVH7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
SWSAP1Q6NVH7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SWSAP1Q6NVH7 CR392000.1-201ENST00000624770 1228 ntBASIC21.97■■□□□ 1.11
SWSAP1Q6NVH7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SWSAP1Q6NVH7 AC099778.1-201ENST00000568593 1911 ntBASIC21.97■■□□□ 1.11
SWSAP1Q6NVH7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.97■■□□□ 1.11
SWSAP1Q6NVH7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.97■■□□□ 1.11
SWSAP1Q6NVH7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.97■■□□□ 1.11
SWSAP1Q6NVH7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SWSAP1Q6NVH7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
SWSAP1Q6NVH7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.96■■□□□ 1.11
SWSAP1Q6NVH7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SWSAP1Q6NVH7 AP001271.2-201ENST00000624018 1556 ntBASIC21.96■■□□□ 1.11
SWSAP1Q6NVH7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.96■■□□□ 1.11
SWSAP1Q6NVH7 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.96■■□□□ 1.11
SWSAP1Q6NVH7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SWSAP1Q6NVH7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SWSAP1Q6NVH7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
SWSAP1Q6NVH7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.96■■□□□ 1.11
SWSAP1Q6NVH7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.96■■□□□ 1.11
SWSAP1Q6NVH7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.96■■□□□ 1.11
SWSAP1Q6NVH7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.96■■□□□ 1.11
SWSAP1Q6NVH7 AL355075.4-201ENST00000554988 638 ntBASIC21.96■■□□□ 1.11
SWSAP1Q6NVH7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.96■■□□□ 1.11
SWSAP1Q6NVH7 AP003071.4-201ENST00000562276 1284 ntBASIC21.96■■□□□ 1.11
SWSAP1Q6NVH7 C1QL1P1-201ENST00000568105 661 ntBASIC21.96■■□□□ 1.11
SWSAP1Q6NVH7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.96■■□□□ 1.11
SWSAP1Q6NVH7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SWSAP1Q6NVH7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SWSAP1Q6NVH7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.96■■□□□ 1.11
SWSAP1Q6NVH7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
SWSAP1Q6NVH7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
SWSAP1Q6NVH7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.95■■□□□ 1.1
SWSAP1Q6NVH7 TMEM179-206ENST00000616017 1645 ntBASIC21.95■■□□□ 1.1
SWSAP1Q6NVH7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
SWSAP1Q6NVH7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
SWSAP1Q6NVH7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
SWSAP1Q6NVH7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.95■■□□□ 1.1
SWSAP1Q6NVH7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms