Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC22.38■■□□□ 1.17
COL13A1Q5TAT6 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC22.38■■□□□ 1.17
COL13A1Q5TAT6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC22.38■■□□□ 1.17
COL13A1Q5TAT6 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
COL13A1Q5TAT6 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC22.38■■□□□ 1.17
COL13A1Q5TAT6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC22.38■■□□□ 1.17
COL13A1Q5TAT6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL13A1Q5TAT6 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC22.38■■□□□ 1.17
COL13A1Q5TAT6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL13A1Q5TAT6 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL13A1Q5TAT6 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
COL13A1Q5TAT6 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL13A1Q5TAT6 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC22.38■■□□□ 1.17
COL13A1Q5TAT6 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
COL13A1Q5TAT6 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
COL13A1Q5TAT6 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC22.37■■□□□ 1.17
COL13A1Q5TAT6 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL13A1Q5TAT6 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
COL13A1Q5TAT6 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL13A1Q5TAT6 DRAXINP1-201ENST00000437611 948 ntBASIC22.37■■□□□ 1.17
COL13A1Q5TAT6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC22.37■■□□□ 1.17
COL13A1Q5TAT6 CIB2-208ENST00000560618 804 ntTSL 2 BASIC22.37■■□□□ 1.17
COL13A1Q5TAT6 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
COL13A1Q5TAT6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL13A1Q5TAT6 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC22.37■■□□□ 1.17
COL13A1Q5TAT6 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC22.36■■□□□ 1.17
COL13A1Q5TAT6 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.36■■□□□ 1.17
COL13A1Q5TAT6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL13A1Q5TAT6 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL13A1Q5TAT6 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL13A1Q5TAT6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL13A1Q5TAT6 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
COL13A1Q5TAT6 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL13A1Q5TAT6 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL13A1Q5TAT6 AC112482.1-201ENST00000492080 688 ntBASIC22.36■■□□□ 1.17
COL13A1Q5TAT6 RFPL4AP1-201ENST00000530883 850 ntBASIC22.36■■□□□ 1.17
COL13A1Q5TAT6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC22.36■■□□□ 1.17
COL13A1Q5TAT6 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC22.36■■□□□ 1.17
COL13A1Q5TAT6 NEK4P2-201ENST00000580004 1012 ntBASIC22.36■■□□□ 1.17
COL13A1Q5TAT6 AC134684.3-201ENST00000641758 218 ntBASIC22.36■■□□□ 1.17
COL13A1Q5TAT6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
COL13A1Q5TAT6 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.36■■□□□ 1.17
COL13A1Q5TAT6 ZNF259P1-201ENST00000407656 1365 ntBASIC22.36■■□□□ 1.17
COL13A1Q5TAT6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.36■■□□□ 1.17
COL13A1Q5TAT6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
COL13A1Q5TAT6 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.35■■□□□ 1.17
COL13A1Q5TAT6 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC22.35■■□□□ 1.17
COL13A1Q5TAT6 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC22.35■■□□□ 1.17
COL13A1Q5TAT6 WDR53-203ENST00000429115 683 ntTSL 2 BASIC22.35■■□□□ 1.17
COL13A1Q5TAT6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC22.35■■□□□ 1.17
COL13A1Q5TAT6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC22.35■■□□□ 1.17
COL13A1Q5TAT6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL13A1Q5TAT6 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
COL13A1Q5TAT6 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC22.34■■□□□ 1.17
COL13A1Q5TAT6 KRT18P28-201ENST00000453838 1332 ntBASIC22.34■■□□□ 1.17
COL13A1Q5TAT6 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.34■■□□□ 1.17
COL13A1Q5TAT6 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
COL13A1Q5TAT6 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC22.34■■□□□ 1.17
COL13A1Q5TAT6 PNKD-204ENST00000436005 978 ntTSL 5 BASIC22.34■■□□□ 1.17
COL13A1Q5TAT6 FIS1-203ENST00000442303 631 ntTSL 3 BASIC22.34■■□□□ 1.17
COL13A1Q5TAT6 AF238378.1-201ENST00000526806 358 ntBASIC22.34■■□□□ 1.17
COL13A1Q5TAT6 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC22.34■■□□□ 1.17
COL13A1Q5TAT6 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.34■■□□□ 1.17
COL13A1Q5TAT6 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC22.34■■□□□ 1.17
COL13A1Q5TAT6 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC22.34■■□□□ 1.17
COL13A1Q5TAT6 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22.33■■□□□ 1.17
COL13A1Q5TAT6 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.33■■□□□ 1.17
COL13A1Q5TAT6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
COL13A1Q5TAT6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC22.33■■□□□ 1.17
COL13A1Q5TAT6 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
COL13A1Q5TAT6 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
COL13A1Q5TAT6 FAM197Y8-203ENST00000450145 560 ntBASIC22.33■■□□□ 1.17
COL13A1Q5TAT6 TOB2P1-201ENST00000469761 992 ntBASIC22.33■■□□□ 1.17
COL13A1Q5TAT6 ABR-204ENST00000543210 1049 ntTSL 2 BASIC22.33■■□□□ 1.17
COL13A1Q5TAT6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
COL13A1Q5TAT6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC22.33■■□□□ 1.17
COL13A1Q5TAT6 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
COL13A1Q5TAT6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
COL13A1Q5TAT6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
COL13A1Q5TAT6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
COL13A1Q5TAT6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
COL13A1Q5TAT6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
COL13A1Q5TAT6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
COL13A1Q5TAT6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
COL13A1Q5TAT6 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
COL13A1Q5TAT6 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.33■■□□□ 1.16
COL13A1Q5TAT6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.32■■□□□ 1.16
COL13A1Q5TAT6 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL13A1Q5TAT6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL13A1Q5TAT6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
COL13A1Q5TAT6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL13A1Q5TAT6 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL13A1Q5TAT6 PAWRP1-201ENST00000451083 565 ntBASIC22.32■■□□□ 1.16
COL13A1Q5TAT6 SAPCD2P3-201ENST00000455031 850 ntBASIC22.32■■□□□ 1.16
COL13A1Q5TAT6 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC22.32■■□□□ 1.16
COL13A1Q5TAT6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
COL13A1Q5TAT6 AC009065.1-201ENST00000564055 1225 ntBASIC22.32■■□□□ 1.16
COL13A1Q5TAT6 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC22.32■■□□□ 1.16
COL13A1Q5TAT6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC22.32■■□□□ 1.16
COL13A1Q5TAT6 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms