Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
SNAPC4Q5SXM2 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
SNAPC4Q5SXM2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC32.45■■■□□ 2.79
SNAPC4Q5SXM2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
SNAPC4Q5SXM2 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC32.45■■■□□ 2.79
SNAPC4Q5SXM2 AL512604.3-201ENST00000569583 964 ntBASIC32.45■■■□□ 2.79
SNAPC4Q5SXM2 RN7SL510P-201ENST00000581311 263 ntBASIC32.45■■■□□ 2.79
SNAPC4Q5SXM2 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
SNAPC4Q5SXM2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
SNAPC4Q5SXM2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
SNAPC4Q5SXM2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC32.45■■■□□ 2.78
SNAPC4Q5SXM2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC32.44■■■□□ 2.78
SNAPC4Q5SXM2 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
SNAPC4Q5SXM2 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
SNAPC4Q5SXM2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
SNAPC4Q5SXM2 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC32.44■■■□□ 2.78
SNAPC4Q5SXM2 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC32.44■■■□□ 2.78
SNAPC4Q5SXM2 SNX5-210ENST00000481323 562 ntTSL 3 BASIC32.44■■■□□ 2.78
SNAPC4Q5SXM2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC32.44■■■□□ 2.78
SNAPC4Q5SXM2 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC32.44■■■□□ 2.78
SNAPC4Q5SXM2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC32.44■■■□□ 2.78
SNAPC4Q5SXM2 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC32.44■■■□□ 2.78
SNAPC4Q5SXM2 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC32.44■■■□□ 2.78
SNAPC4Q5SXM2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC32.44■■■□□ 2.78
SNAPC4Q5SXM2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
SNAPC4Q5SXM2 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC32.43■■■□□ 2.78
SNAPC4Q5SXM2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
SNAPC4Q5SXM2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
SNAPC4Q5SXM2 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
SNAPC4Q5SXM2 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
SNAPC4Q5SXM2 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC32.43■■■□□ 2.78
SNAPC4Q5SXM2 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
SNAPC4Q5SXM2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC32.43■■■□□ 2.78
SNAPC4Q5SXM2 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC32.43■■■□□ 2.78
SNAPC4Q5SXM2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
SNAPC4Q5SXM2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
SNAPC4Q5SXM2 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
SNAPC4Q5SXM2 AC018553.1-201ENST00000616682 1458 ntBASIC32.43■■■□□ 2.78
SNAPC4Q5SXM2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
SNAPC4Q5SXM2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
SNAPC4Q5SXM2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
SNAPC4Q5SXM2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
SNAPC4Q5SXM2 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC32.42■■■□□ 2.78
SNAPC4Q5SXM2 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC32.42■■■□□ 2.78
SNAPC4Q5SXM2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC32.42■■■□□ 2.78
SNAPC4Q5SXM2 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
SNAPC4Q5SXM2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC32.42■■■□□ 2.78
SNAPC4Q5SXM2 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC32.42■■■□□ 2.78
SNAPC4Q5SXM2 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC32.42■■■□□ 2.78
SNAPC4Q5SXM2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
SNAPC4Q5SXM2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC32.42■■■□□ 2.78
SNAPC4Q5SXM2 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
SNAPC4Q5SXM2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
SNAPC4Q5SXM2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC32.42■■■□□ 2.78
SNAPC4Q5SXM2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
SNAPC4Q5SXM2 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
SNAPC4Q5SXM2 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
SNAPC4Q5SXM2 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC32.42■■■□□ 2.78
SNAPC4Q5SXM2 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC32.42■■■□□ 2.78
SNAPC4Q5SXM2 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC32.42■■■□□ 2.78
SNAPC4Q5SXM2 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC32.42■■■□□ 2.78
SNAPC4Q5SXM2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC32.42■■■□□ 2.78
SNAPC4Q5SXM2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC32.42■■■□□ 2.78
SNAPC4Q5SXM2 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC32.41■■■□□ 2.78
SNAPC4Q5SXM2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC32.41■■■□□ 2.78
SNAPC4Q5SXM2 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
SNAPC4Q5SXM2 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC32.41■■■□□ 2.78
SNAPC4Q5SXM2 BCL10-202ENST00000620248 774 ntTSL 5 BASIC32.41■■■□□ 2.78
SNAPC4Q5SXM2 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
SNAPC4Q5SXM2 ECEL1P1-201ENST00000373592 1742 ntBASIC32.41■■■□□ 2.78
SNAPC4Q5SXM2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC32.41■■■□□ 2.78
SNAPC4Q5SXM2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
SNAPC4Q5SXM2 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC32.4■■■□□ 2.78
SNAPC4Q5SXM2 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
SNAPC4Q5SXM2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC32.4■■■□□ 2.78
SNAPC4Q5SXM2 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC32.4■■■□□ 2.78
SNAPC4Q5SXM2 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
SNAPC4Q5SXM2 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
SNAPC4Q5SXM2 SPDYE15P-201ENST00000424157 909 ntBASIC32.4■■■□□ 2.78
SNAPC4Q5SXM2 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
SNAPC4Q5SXM2 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC32.4■■■□□ 2.78
SNAPC4Q5SXM2 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC32.4■■■□□ 2.78
SNAPC4Q5SXM2 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC32.4■■■□□ 2.78
SNAPC4Q5SXM2 PRR29-207ENST00000580752 458 ntTSL 3 BASIC32.4■■■□□ 2.78
SNAPC4Q5SXM2 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
SNAPC4Q5SXM2 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
SNAPC4Q5SXM2 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
SNAPC4Q5SXM2 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC32.39■■■□□ 2.78
SNAPC4Q5SXM2 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC32.39■■■□□ 2.78
SNAPC4Q5SXM2 AC004263.2-201ENST00000617183 678 ntBASIC32.39■■■□□ 2.78
SNAPC4Q5SXM2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
SNAPC4Q5SXM2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
SNAPC4Q5SXM2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
SNAPC4Q5SXM2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC32.39■■■□□ 2.78
SNAPC4Q5SXM2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC32.39■■■□□ 2.77
SNAPC4Q5SXM2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC32.38■■■□□ 2.77
SNAPC4Q5SXM2 KRT8P10-201ENST00000450021 1447 ntBASIC32.38■■■□□ 2.77
SNAPC4Q5SXM2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
SNAPC4Q5SXM2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC32.38■■■□□ 2.77
SNAPC4Q5SXM2 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms