Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.79■□□□□ 0.44
RNFT1Q5M7Z0 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.79■□□□□ 0.44
RNFT1Q5M7Z0 AL031985.4-201ENST00000642138 673 ntBASIC17.79■□□□□ 0.44
RNFT1Q5M7Z0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNFT1Q5M7Z0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNFT1Q5M7Z0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNFT1Q5M7Z0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNFT1Q5M7Z0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNFT1Q5M7Z0 BX119927.1-201ENST00000636596 1552 ntBASIC17.79■□□□□ 0.44
RNFT1Q5M7Z0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNFT1Q5M7Z0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.78■□□□□ 0.44
RNFT1Q5M7Z0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.78■□□□□ 0.44
RNFT1Q5M7Z0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.78■□□□□ 0.44
RNFT1Q5M7Z0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNFT1Q5M7Z0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNFT1Q5M7Z0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNFT1Q5M7Z0 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNFT1Q5M7Z0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.78■□□□□ 0.44
RNFT1Q5M7Z0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.78■□□□□ 0.44
RNFT1Q5M7Z0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.78■□□□□ 0.44
RNFT1Q5M7Z0 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.78■□□□□ 0.44
RNFT1Q5M7Z0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.78■□□□□ 0.44
RNFT1Q5M7Z0 AC145285.6-201ENST00000604632 637 ntBASIC17.78■□□□□ 0.44
RNFT1Q5M7Z0 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.78■□□□□ 0.44
RNFT1Q5M7Z0 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RNFT1Q5M7Z0 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RNFT1Q5M7Z0 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.78■□□□□ 0.44
RNFT1Q5M7Z0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNFT1Q5M7Z0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RNFT1Q5M7Z0 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNFT1Q5M7Z0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
RNFT1Q5M7Z0 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNFT1Q5M7Z0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.77■□□□□ 0.44
RNFT1Q5M7Z0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNFT1Q5M7Z0 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNFT1Q5M7Z0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNFT1Q5M7Z0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RNFT1Q5M7Z0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RNFT1Q5M7Z0 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
RNFT1Q5M7Z0 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.77■□□□□ 0.44
RNFT1Q5M7Z0 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNFT1Q5M7Z0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.77■□□□□ 0.44
RNFT1Q5M7Z0 AC011506.1-201ENST00000474329 610 ntBASIC17.77■□□□□ 0.44
RNFT1Q5M7Z0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNFT1Q5M7Z0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
RNFT1Q5M7Z0 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.77■□□□□ 0.44
RNFT1Q5M7Z0 RN7SL850P-201ENST00000579959 291 ntBASIC17.77■□□□□ 0.44
RNFT1Q5M7Z0 AC010947.1-201ENST00000623454 693 ntBASIC17.77■□□□□ 0.44
RNFT1Q5M7Z0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNFT1Q5M7Z0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.77■□□□□ 0.43
RNFT1Q5M7Z0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNFT1Q5M7Z0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNFT1Q5M7Z0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RNFT1Q5M7Z0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.77■□□□□ 0.43
RNFT1Q5M7Z0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.76■□□□□ 0.43
RNFT1Q5M7Z0 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNFT1Q5M7Z0 AC073314.1-201ENST00000568729 2216 ntBASIC17.76■□□□□ 0.43
RNFT1Q5M7Z0 AC020907.5-201ENST00000624372 1936 ntBASIC17.76■□□□□ 0.43
RNFT1Q5M7Z0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNFT1Q5M7Z0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RNFT1Q5M7Z0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNFT1Q5M7Z0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
RNFT1Q5M7Z0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNFT1Q5M7Z0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.76■□□□□ 0.43
RNFT1Q5M7Z0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNFT1Q5M7Z0 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNFT1Q5M7Z0 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNFT1Q5M7Z0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNFT1Q5M7Z0 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNFT1Q5M7Z0 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNFT1Q5M7Z0 AC004980.1-204ENST00000429707 299 ntBASIC17.76■□□□□ 0.43
RNFT1Q5M7Z0 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.76■□□□□ 0.43
RNFT1Q5M7Z0 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNFT1Q5M7Z0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNFT1Q5M7Z0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNFT1Q5M7Z0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNFT1Q5M7Z0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.76■□□□□ 0.43
RNFT1Q5M7Z0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.76■□□□□ 0.43
RNFT1Q5M7Z0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.76■□□□□ 0.43
RNFT1Q5M7Z0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNFT1Q5M7Z0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RNFT1Q5M7Z0 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNFT1Q5M7Z0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.75■□□□□ 0.43
RNFT1Q5M7Z0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.75■□□□□ 0.43
RNFT1Q5M7Z0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNFT1Q5M7Z0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNFT1Q5M7Z0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNFT1Q5M7Z0 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNFT1Q5M7Z0 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNFT1Q5M7Z0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNFT1Q5M7Z0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.75■□□□□ 0.43
RNFT1Q5M7Z0 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.75■□□□□ 0.43
RNFT1Q5M7Z0 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.75■□□□□ 0.43
RNFT1Q5M7Z0 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNFT1Q5M7Z0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.75■□□□□ 0.43
RNFT1Q5M7Z0 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.75■□□□□ 0.43
RNFT1Q5M7Z0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNFT1Q5M7Z0 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNFT1Q5M7Z0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
RNFT1Q5M7Z0 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms