Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
HERC4Q5GLZ8 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
HERC4Q5GLZ8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
HERC4Q5GLZ8 KRT18P21-201ENST00000515767 1272 ntBASIC22.02■■□□□ 1.12
HERC4Q5GLZ8 REXO2-208ENST00000539754 791 ntTSL 2 BASIC22.02■■□□□ 1.12
HERC4Q5GLZ8 AC060766.5-201ENST00000590539 871 ntBASIC22.02■■□□□ 1.12
HERC4Q5GLZ8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC22.02■■□□□ 1.12
HERC4Q5GLZ8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
HERC4Q5GLZ8 TMEM179-206ENST00000616017 1645 ntBASIC22.02■■□□□ 1.11
HERC4Q5GLZ8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.11
HERC4Q5GLZ8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
HERC4Q5GLZ8 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC22.01■■□□□ 1.11
HERC4Q5GLZ8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC22.01■■□□□ 1.11
HERC4Q5GLZ8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
HERC4Q5GLZ8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC22.01■■□□□ 1.11
HERC4Q5GLZ8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HERC4Q5GLZ8 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HERC4Q5GLZ8 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HERC4Q5GLZ8 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.01■■□□□ 1.11
HERC4Q5GLZ8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
HERC4Q5GLZ8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC22.01■■□□□ 1.11
HERC4Q5GLZ8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.01■■□□□ 1.11
HERC4Q5GLZ8 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC22.01■■□□□ 1.11
HERC4Q5GLZ8 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC22.01■■□□□ 1.11
HERC4Q5GLZ8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC22.01■■□□□ 1.11
HERC4Q5GLZ8 HES2-206ENST00000489730 730 ntTSL 2 BASIC22.01■■□□□ 1.11
HERC4Q5GLZ8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC22.01■■□□□ 1.11
HERC4Q5GLZ8 PNMA6B-201ENST00000538162 1200 ntBASIC22.01■■□□□ 1.11
HERC4Q5GLZ8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC22.01■■□□□ 1.11
HERC4Q5GLZ8 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
HERC4Q5GLZ8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC22.01■■□□□ 1.11
HERC4Q5GLZ8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC22.01■■□□□ 1.11
HERC4Q5GLZ8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HERC4Q5GLZ8 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC22.01■■□□□ 1.11
HERC4Q5GLZ8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
HERC4Q5GLZ8 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC22■■□□□ 1.11
HERC4Q5GLZ8 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC22■■□□□ 1.11
HERC4Q5GLZ8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
HERC4Q5GLZ8 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HERC4Q5GLZ8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HERC4Q5GLZ8 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
HERC4Q5GLZ8 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC22■■□□□ 1.11
HERC4Q5GLZ8 RPPH1-201ENST00000516869 333 ntBASIC22■■□□□ 1.11
HERC4Q5GLZ8 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC22■■□□□ 1.11
HERC4Q5GLZ8 FAM197Y4-202ENST00000622692 608 ntBASIC22■■□□□ 1.11
HERC4Q5GLZ8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC22■■□□□ 1.11
HERC4Q5GLZ8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC22■■□□□ 1.11
HERC4Q5GLZ8 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.99■■□□□ 1.11
HERC4Q5GLZ8 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HERC4Q5GLZ8 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
HERC4Q5GLZ8 PHGDH-210ENST00000641115 1638 ntBASIC21.99■■□□□ 1.11
HERC4Q5GLZ8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
HERC4Q5GLZ8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HERC4Q5GLZ8 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
HERC4Q5GLZ8 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HERC4Q5GLZ8 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
HERC4Q5GLZ8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HERC4Q5GLZ8 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.99■■□□□ 1.11
HERC4Q5GLZ8 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.99■■□□□ 1.11
HERC4Q5GLZ8 SNORA78-201ENST00000459373 127 ntBASIC21.99■■□□□ 1.11
HERC4Q5GLZ8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.99■■□□□ 1.11
HERC4Q5GLZ8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.99■■□□□ 1.11
HERC4Q5GLZ8 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.99■■□□□ 1.11
HERC4Q5GLZ8 Z99916.2-201ENST00000604037 246 ntBASIC21.99■■□□□ 1.11
HERC4Q5GLZ8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.99■■□□□ 1.11
HERC4Q5GLZ8 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.99■■□□□ 1.11
HERC4Q5GLZ8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.99■■□□□ 1.11
HERC4Q5GLZ8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
HERC4Q5GLZ8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HERC4Q5GLZ8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HERC4Q5GLZ8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HERC4Q5GLZ8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HERC4Q5GLZ8 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.98■■□□□ 1.11
HERC4Q5GLZ8 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
HERC4Q5GLZ8 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HERC4Q5GLZ8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.98■■□□□ 1.11
HERC4Q5GLZ8 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.98■■□□□ 1.11
HERC4Q5GLZ8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HERC4Q5GLZ8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
HERC4Q5GLZ8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
HERC4Q5GLZ8 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HERC4Q5GLZ8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.98■■□□□ 1.11
HERC4Q5GLZ8 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.98■■□□□ 1.11
HERC4Q5GLZ8 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.98■■□□□ 1.11
HERC4Q5GLZ8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HERC4Q5GLZ8 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.98■■□□□ 1.11
HERC4Q5GLZ8 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.98■■□□□ 1.11
HERC4Q5GLZ8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.98■■□□□ 1.11
HERC4Q5GLZ8 AC008403.3-201ENST00000598924 454 ntBASIC21.98■■□□□ 1.11
HERC4Q5GLZ8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.98■■□□□ 1.11
HERC4Q5GLZ8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
HERC4Q5GLZ8 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
HERC4Q5GLZ8 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
HERC4Q5GLZ8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
HERC4Q5GLZ8 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.98■■□□□ 1.11
HERC4Q5GLZ8 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HERC4Q5GLZ8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HERC4Q5GLZ8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.97■■□□□ 1.11
HERC4Q5GLZ8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HERC4Q5GLZ8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms