Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.1■□□□□ 0.97
CTC1Q2NKJ3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.1■□□□□ 0.97
CTC1Q2NKJ3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CTC1Q2NKJ3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CTC1Q2NKJ3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CTC1Q2NKJ3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.1■□□□□ 0.97
CTC1Q2NKJ3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CTC1Q2NKJ3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.1■□□□□ 0.97
CTC1Q2NKJ3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.09■□□□□ 0.97
CTC1Q2NKJ3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTC1Q2NKJ3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTC1Q2NKJ3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTC1Q2NKJ3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
CTC1Q2NKJ3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CTC1Q2NKJ3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTC1Q2NKJ3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.09■□□□□ 0.97
CTC1Q2NKJ3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CTC1Q2NKJ3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTC1Q2NKJ3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTC1Q2NKJ3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTC1Q2NKJ3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.09■□□□□ 0.97
CTC1Q2NKJ3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.09■□□□□ 0.97
CTC1Q2NKJ3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTC1Q2NKJ3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTC1Q2NKJ3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTC1Q2NKJ3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.09■□□□□ 0.97
CTC1Q2NKJ3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.09■□□□□ 0.97
CTC1Q2NKJ3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.09■□□□□ 0.97
CTC1Q2NKJ3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.09■□□□□ 0.97
CTC1Q2NKJ3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.09■□□□□ 0.97
CTC1Q2NKJ3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.09■□□□□ 0.97
CTC1Q2NKJ3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.09■□□□□ 0.97
CTC1Q2NKJ3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.09■□□□□ 0.97
CTC1Q2NKJ3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.09■□□□□ 0.97
CTC1Q2NKJ3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.09■□□□□ 0.97
CTC1Q2NKJ3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTC1Q2NKJ3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
CTC1Q2NKJ3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CTC1Q2NKJ3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTC1Q2NKJ3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
CTC1Q2NKJ3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTC1Q2NKJ3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
CTC1Q2NKJ3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CTC1Q2NKJ3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CTC1Q2NKJ3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTC1Q2NKJ3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTC1Q2NKJ3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTC1Q2NKJ3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.08■□□□□ 0.97
CTC1Q2NKJ3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CTC1Q2NKJ3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTC1Q2NKJ3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTC1Q2NKJ3 UPK3BP1-201ENST00000428678 509 ntBASIC21.08■□□□□ 0.97
CTC1Q2NKJ3 LIN28AP1-201ENST00000429574 405 ntBASIC21.08■□□□□ 0.97
CTC1Q2NKJ3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.08■□□□□ 0.97
CTC1Q2NKJ3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTC1Q2NKJ3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.08■□□□□ 0.97
CTC1Q2NKJ3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.08■□□□□ 0.97
CTC1Q2NKJ3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.08■□□□□ 0.97
CTC1Q2NKJ3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.08■□□□□ 0.97
CTC1Q2NKJ3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.08■□□□□ 0.97
CTC1Q2NKJ3 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.08■□□□□ 0.97
CTC1Q2NKJ3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.08■□□□□ 0.97
CTC1Q2NKJ3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.08■□□□□ 0.97
CTC1Q2NKJ3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CTC1Q2NKJ3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CTC1Q2NKJ3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
CTC1Q2NKJ3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.08■□□□□ 0.96
CTC1Q2NKJ3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CTC1Q2NKJ3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTC1Q2NKJ3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTC1Q2NKJ3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.07■□□□□ 0.96
CTC1Q2NKJ3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTC1Q2NKJ3 AC007952.6-201ENST00000573168 2673 ntBASIC21.07■□□□□ 0.96
CTC1Q2NKJ3 AC003957.1-201ENST00000625108 2673 ntBASIC21.07■□□□□ 0.96
CTC1Q2NKJ3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTC1Q2NKJ3 RNF165-205ENST00000588679 2904 ntBASIC21.07■□□□□ 0.96
CTC1Q2NKJ3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTC1Q2NKJ3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.07■□□□□ 0.96
CTC1Q2NKJ3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.07■□□□□ 0.96
CTC1Q2NKJ3 MESTP1-201ENST00000404287 994 ntBASIC21.07■□□□□ 0.96
CTC1Q2NKJ3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTC1Q2NKJ3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.07■□□□□ 0.96
CTC1Q2NKJ3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.07■□□□□ 0.96
CTC1Q2NKJ3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CTC1Q2NKJ3 EGLN1P1-201ENST00000531623 762 ntBASIC21.07■□□□□ 0.96
CTC1Q2NKJ3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CTC1Q2NKJ3 AC091076.1-201ENST00000610741 619 ntBASIC21.07■□□□□ 0.96
CTC1Q2NKJ3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.07■□□□□ 0.96
CTC1Q2NKJ3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTC1Q2NKJ3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
CTC1Q2NKJ3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.07■□□□□ 0.96
CTC1Q2NKJ3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
CTC1Q2NKJ3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CTC1Q2NKJ3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.07■□□□□ 0.96
CTC1Q2NKJ3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTC1Q2NKJ3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CTC1Q2NKJ3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTC1Q2NKJ3 TSPY14P-201ENST00000303979 915 ntBASIC21.06■□□□□ 0.96
CTC1Q2NKJ3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTC1Q2NKJ3 ATP5G1P1-201ENST00000448724 379 ntBASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms