Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC15.52■□□□□ 0.08
CCL20P78556 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCL20P78556 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.52■□□□□ 0.08
CCL20P78556 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCL20P78556 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCL20P78556 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CCL20P78556 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCL20P78556 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCL20P78556 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCL20P78556 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCL20P78556 PTCHD3P2-201ENST00000424937 1205 ntBASIC15.52■□□□□ 0.08
CCL20P78556 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC15.52■□□□□ 0.08
CCL20P78556 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCL20P78556 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCL20P78556 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CCL20P78556 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCL20P78556 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CCL20P78556 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CCL20P78556 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CCL20P78556 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.07
CCL20P78556 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CCL20P78556 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC15.52■□□□□ 0.07
CCL20P78556 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.52■□□□□ 0.07
CCL20P78556 AC116050.2-201ENST00000612102 1779 ntBASIC15.52■□□□□ 0.07
CCL20P78556 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CCL20P78556 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCL20P78556 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCL20P78556 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL20P78556 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCL20P78556 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
CCL20P78556 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CCL20P78556 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCL20P78556 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CCL20P78556 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC15.51■□□□□ 0.07
CCL20P78556 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL20P78556 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCL20P78556 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CCL20P78556 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC15.51■□□□□ 0.07
CCL20P78556 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC15.51■□□□□ 0.07
CCL20P78556 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC15.51■□□□□ 0.07
CCL20P78556 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCL20P78556 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL20P78556 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC15.51■□□□□ 0.07
CCL20P78556 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL20P78556 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL20P78556 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC15.51■□□□□ 0.07
CCL20P78556 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCL20P78556 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCL20P78556 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCL20P78556 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CCL20P78556 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.51■□□□□ 0.07
CCL20P78556 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
CCL20P78556 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CCL20P78556 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCL20P78556 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC15.5■□□□□ 0.07
CCL20P78556 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCL20P78556 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CCL20P78556 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.5■□□□□ 0.07
CCL20P78556 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
CCL20P78556 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCL20P78556 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCL20P78556 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCL20P78556 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CCL20P78556 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CCL20P78556 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCL20P78556 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CCL20P78556 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCL20P78556 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCL20P78556 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCL20P78556 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC15.5■□□□□ 0.07
CCL20P78556 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC15.5■□□□□ 0.07
CCL20P78556 AC092171.4-201ENST00000609130 632 ntBASIC15.5■□□□□ 0.07
CCL20P78556 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CCL20P78556 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCL20P78556 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCL20P78556 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCL20P78556 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCL20P78556 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CCL20P78556 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCL20P78556 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCL20P78556 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CCL20P78556 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCL20P78556 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCL20P78556 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCL20P78556 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCL20P78556 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CCL20P78556 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CCL20P78556 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCL20P78556 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.49■□□□□ 0.07
CCL20P78556 AC138932.1-201ENST00000534164 6830 ntBASIC15.49■□□□□ 0.07
CCL20P78556 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCL20P78556 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.49■□□□□ 0.07
CCL20P78556 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.49■□□□□ 0.07
CCL20P78556 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCL20P78556 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CCL20P78556 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCL20P78556 MFF-207ENST00000409565 1548 ntTSL 2 BASIC15.49■□□□□ 0.07
CCL20P78556 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.49■□□□□ 0.07
CCL20P78556 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.49■□□□□ 0.07
CCL20P78556 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms