Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
SKP1P63208 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.72■□□□□ 0.59
SKP1P63208 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.72■□□□□ 0.59
SKP1P63208 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SKP1P63208 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SKP1P63208 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SKP1P63208 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SKP1P63208 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.71■□□□□ 0.59
SKP1P63208 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SKP1P63208 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SKP1P63208 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SKP1P63208 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.71■□□□□ 0.59
SKP1P63208 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SKP1P63208 AC099778.1-201ENST00000568593 1911 ntBASIC18.71■□□□□ 0.59
SKP1P63208 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SKP1P63208 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SKP1P63208 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.71■□□□□ 0.59
SKP1P63208 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.71■□□□□ 0.59
SKP1P63208 FAM197Y4-202ENST00000622692 608 ntBASIC18.71■□□□□ 0.59
SKP1P63208 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
SKP1P63208 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SKP1P63208 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SKP1P63208 TFP1-202ENST00000475455 1573 ntBASIC18.71■□□□□ 0.59
SKP1P63208 AC009237.14-201ENST00000609975 1594 ntBASIC18.71■□□□□ 0.59
SKP1P63208 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.71■□□□□ 0.59
SKP1P63208 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SKP1P63208 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SKP1P63208 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.71■□□□□ 0.59
SKP1P63208 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SKP1P63208 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
SKP1P63208 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SKP1P63208 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.7■□□□□ 0.58
SKP1P63208 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.7■□□□□ 0.58
SKP1P63208 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SKP1P63208 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.7■□□□□ 0.58
SKP1P63208 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SKP1P63208 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SKP1P63208 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SKP1P63208 YBX1P10-201ENST00000444752 975 ntBASIC18.7■□□□□ 0.58
SKP1P63208 AC133681.1-201ENST00000465482 601 ntBASIC18.7■□□□□ 0.58
SKP1P63208 C1QBPP2-201ENST00000528754 825 ntBASIC18.7■□□□□ 0.58
SKP1P63208 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SKP1P63208 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.7■□□□□ 0.58
SKP1P63208 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.7■□□□□ 0.58
SKP1P63208 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.7■□□□□ 0.58
SKP1P63208 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.7■□□□□ 0.58
SKP1P63208 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.7■□□□□ 0.58
SKP1P63208 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SKP1P63208 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.7■□□□□ 0.58
SKP1P63208 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SKP1P63208 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SKP1P63208 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SKP1P63208 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SKP1P63208 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.7■□□□□ 0.58
SKP1P63208 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SKP1P63208 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SKP1P63208 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SKP1P63208 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
SKP1P63208 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
SKP1P63208 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.69■□□□□ 0.58
SKP1P63208 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.69■□□□□ 0.58
SKP1P63208 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SKP1P63208 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SKP1P63208 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SKP1P63208 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.69■□□□□ 0.58
SKP1P63208 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SKP1P63208 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SKP1P63208 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SKP1P63208 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SKP1P63208 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.69■□□□□ 0.58
SKP1P63208 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.69■□□□□ 0.58
SKP1P63208 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.69■□□□□ 0.58
SKP1P63208 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.69■□□□□ 0.58
SKP1P63208 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.69■□□□□ 0.58
SKP1P63208 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SKP1P63208 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.69■□□□□ 0.58
SKP1P63208 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SKP1P63208 NBPF21P-201ENST00000425093 1451 ntBASIC18.69■□□□□ 0.58
SKP1P63208 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.69■□□□□ 0.58
SKP1P63208 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SKP1P63208 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SKP1P63208 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.69■□□□□ 0.58
SKP1P63208 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
SKP1P63208 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SKP1P63208 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SKP1P63208 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SKP1P63208 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SKP1P63208 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SKP1P63208 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SKP1P63208 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SKP1P63208 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SKP1P63208 PRORSD1P-201ENST00000295112 541 ntBASIC18.68■□□□□ 0.58
SKP1P63208 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SKP1P63208 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SKP1P63208 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.68■□□□□ 0.58
SKP1P63208 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.68■□□□□ 0.58
SKP1P63208 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
SKP1P63208 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.68■□□□□ 0.58
SKP1P63208 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.68■□□□□ 0.58
SKP1P63208 AC110285.5-201ENST00000611501 352 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms