Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.75■□□□□ 0.91
USP46P62068 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.75■□□□□ 0.91
USP46P62068 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.75■□□□□ 0.91
USP46P62068 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.75■□□□□ 0.91
USP46P62068 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP46P62068 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP46P62068 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP46P62068 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP46P62068 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP46P62068 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
USP46P62068 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP46P62068 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP46P62068 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP46P62068 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
USP46P62068 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.74■□□□□ 0.91
USP46P62068 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.74■□□□□ 0.91
USP46P62068 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.74■□□□□ 0.91
USP46P62068 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP46P62068 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.74■□□□□ 0.91
USP46P62068 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.74■□□□□ 0.91
USP46P62068 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.74■□□□□ 0.91
USP46P62068 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.74■□□□□ 0.91
USP46P62068 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.74■□□□□ 0.91
USP46P62068 AC004264.1-201ENST00000608354 794 ntBASIC20.74■□□□□ 0.91
USP46P62068 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.74■□□□□ 0.91
USP46P62068 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP46P62068 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP46P62068 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP46P62068 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP46P62068 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP46P62068 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP46P62068 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP46P62068 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP46P62068 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
USP46P62068 AL162377.1-201ENST00000618844 1793 ntBASIC20.73■□□□□ 0.91
USP46P62068 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP46P62068 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
USP46P62068 TSPY15P-201ENST00000457163 923 ntBASIC20.73■□□□□ 0.91
USP46P62068 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.73■□□□□ 0.91
USP46P62068 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.73■□□□□ 0.91
USP46P62068 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.73■□□□□ 0.91
USP46P62068 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
USP46P62068 AL157384.1-201ENST00000445995 2473 ntBASIC20.73■□□□□ 0.91
USP46P62068 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP46P62068 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
USP46P62068 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.73■□□□□ 0.91
USP46P62068 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.73■□□□□ 0.91
USP46P62068 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP46P62068 AP006587.1-201ENST00000534129 1502 ntBASIC20.73■□□□□ 0.91
USP46P62068 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.72■□□□□ 0.91
USP46P62068 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.72■□□□□ 0.91
USP46P62068 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP46P62068 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.72■□□□□ 0.91
USP46P62068 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP46P62068 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.72■□□□□ 0.91
USP46P62068 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.72■□□□□ 0.91
USP46P62068 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP46P62068 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.72■□□□□ 0.91
USP46P62068 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.72■□□□□ 0.91
USP46P62068 AP001412.1-201ENST00000608405 714 ntBASIC20.72■□□□□ 0.91
USP46P62068 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.72■□□□□ 0.91
USP46P62068 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP46P62068 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP46P62068 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP46P62068 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.72■□□□□ 0.91
USP46P62068 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
USP46P62068 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP46P62068 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.71■□□□□ 0.91
USP46P62068 GABARAPL3-202ENST00000624044 1851 ntBASIC20.71■□□□□ 0.91
USP46P62068 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
USP46P62068 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
USP46P62068 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
USP46P62068 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP46P62068 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
USP46P62068 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.71■□□□□ 0.91
USP46P62068 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.71■□□□□ 0.91
USP46P62068 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.71■□□□□ 0.91
USP46P62068 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.71■□□□□ 0.91
USP46P62068 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.71■□□□□ 0.91
USP46P62068 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.71■□□□□ 0.91
USP46P62068 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP46P62068 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP46P62068 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP46P62068 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.71■□□□□ 0.91
USP46P62068 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP46P62068 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
USP46P62068 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP46P62068 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
USP46P62068 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
USP46P62068 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
USP46P62068 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.7■□□□□ 0.9
USP46P62068 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP46P62068 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
USP46P62068 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.7■□□□□ 0.9
USP46P62068 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP46P62068 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
USP46P62068 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.7■□□□□ 0.9
USP46P62068 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP46P62068 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
USP46P62068 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms