Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CMC4P56277 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.69□□□□□ -0.06
CMC4P56277 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CMC4P56277 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CMC4P56277 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CMC4P56277 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC14.69□□□□□ -0.06
CMC4P56277 FAM197Y4-202ENST00000622692 608 ntBASIC14.69□□□□□ -0.06
CMC4P56277 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC14.69□□□□□ -0.06
CMC4P56277 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
CMC4P56277 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CMC4P56277 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CMC4P56277 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CMC4P56277 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC14.69□□□□□ -0.06
CMC4P56277 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CMC4P56277 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CMC4P56277 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CMC4P56277 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CMC4P56277 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
CMC4P56277 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC14.69□□□□□ -0.06
CMC4P56277 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CMC4P56277 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CMC4P56277 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CMC4P56277 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC14.68□□□□□ -0.06
CMC4P56277 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CMC4P56277 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CMC4P56277 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC14.68□□□□□ -0.06
CMC4P56277 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CMC4P56277 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC14.68□□□□□ -0.06
CMC4P56277 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CMC4P56277 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CMC4P56277 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CMC4P56277 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CMC4P56277 ISG20-202ENST00000379224 540 ntTSL 3 BASIC14.68□□□□□ -0.06
CMC4P56277 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CMC4P56277 UBE2SP1-201ENST00000450587 669 ntBASIC14.68□□□□□ -0.06
CMC4P56277 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CMC4P56277 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
CMC4P56277 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC14.68□□□□□ -0.06
CMC4P56277 C1QBPP2-201ENST00000528754 825 ntBASIC14.68□□□□□ -0.06
CMC4P56277 AC142381.4-202ENST00000563973 229 ntBASIC14.68□□□□□ -0.06
CMC4P56277 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC14.68□□□□□ -0.06
CMC4P56277 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CMC4P56277 AP006294.2-201ENST00000641667 209 ntBASIC14.68□□□□□ -0.06
CMC4P56277 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CMC4P56277 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CMC4P56277 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CMC4P56277 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CMC4P56277 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CMC4P56277 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CMC4P56277 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CMC4P56277 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CMC4P56277 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.67□□□□□ -0.06
CMC4P56277 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.67□□□□□ -0.06
CMC4P56277 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CMC4P56277 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CMC4P56277 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CMC4P56277 AL135905.2-201ENST00000584934 1404 ntBASIC14.67□□□□□ -0.06
CMC4P56277 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMC4P56277 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC14.67□□□□□ -0.06
CMC4P56277 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMC4P56277 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMC4P56277 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CMC4P56277 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC14.67□□□□□ -0.06
CMC4P56277 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMC4P56277 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC14.67□□□□□ -0.06
CMC4P56277 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMC4P56277 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC14.67□□□□□ -0.06
CMC4P56277 ABHD17AP1-201ENST00000358206 933 ntBASIC14.67□□□□□ -0.06
CMC4P56277 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CMC4P56277 TUBB8P6-201ENST00000436895 1288 ntBASIC14.67□□□□□ -0.06
CMC4P56277 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC14.67□□□□□ -0.06
CMC4P56277 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.67□□□□□ -0.06
CMC4P56277 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC14.67□□□□□ -0.06
CMC4P56277 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMC4P56277 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC14.67□□□□□ -0.06
CMC4P56277 LY6E-205ENST00000519611 635 ntTSL 3 BASIC14.67□□□□□ -0.06
CMC4P56277 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
CMC4P56277 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.67□□□□□ -0.06
CMC4P56277 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CMC4P56277 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.67□□□□□ -0.06
CMC4P56277 KLF2-202ENST00000592003 564 ntTSL 3 BASIC14.67□□□□□ -0.06
CMC4P56277 CABP2-204ENST00000636477 941 ntTSL 5 BASIC14.67□□□□□ -0.06
CMC4P56277 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMC4P56277 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMC4P56277 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC14.67□□□□□ -0.06
CMC4P56277 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CMC4P56277 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMC4P56277 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMC4P56277 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC14.66□□□□□ -0.06
CMC4P56277 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.66□□□□□ -0.06
CMC4P56277 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMC4P56277 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMC4P56277 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC14.66□□□□□ -0.06
CMC4P56277 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CMC4P56277 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CMC4P56277 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CMC4P56277 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMC4P56277 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CMC4P56277 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC14.66□□□□□ -0.06
CMC4P56277 LINC01006-201ENST00000333319 2292 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms