Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.63■□□□□ 0.57
NR1H2P55055 AC020763.4-201ENST00000623414 4170 ntBASIC18.63■□□□□ 0.57
NR1H2P55055 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NR1H2P55055 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.63■□□□□ 0.57
NR1H2P55055 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.63■□□□□ 0.57
NR1H2P55055 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.63■□□□□ 0.57
NR1H2P55055 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NR1H2P55055 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NR1H2P55055 RAP2CP1-201ENST00000605103 478 ntBASIC18.63■□□□□ 0.57
NR1H2P55055 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NR1H2P55055 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NR1H2P55055 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NR1H2P55055 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
NR1H2P55055 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
NR1H2P55055 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
NR1H2P55055 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
NR1H2P55055 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.63■□□□□ 0.57
NR1H2P55055 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NR1H2P55055 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
NR1H2P55055 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.62■□□□□ 0.57
NR1H2P55055 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NR1H2P55055 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NR1H2P55055 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NR1H2P55055 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NR1H2P55055 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
NR1H2P55055 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NR1H2P55055 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.62■□□□□ 0.57
NR1H2P55055 AC006970.2-201ENST00000450065 779 ntBASIC18.62■□□□□ 0.57
NR1H2P55055 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.62■□□□□ 0.57
NR1H2P55055 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.62■□□□□ 0.57
NR1H2P55055 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.62■□□□□ 0.57
NR1H2P55055 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.62■□□□□ 0.57
NR1H2P55055 AC011767.1-201ENST00000617410 1153 ntBASIC18.62■□□□□ 0.57
NR1H2P55055 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
NR1H2P55055 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NR1H2P55055 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NR1H2P55055 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NR1H2P55055 AC138932.1-201ENST00000534164 6830 ntBASIC18.62■□□□□ 0.57
NR1H2P55055 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NR1H2P55055 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NR1H2P55055 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
NR1H2P55055 PCDHB18P-201ENST00000524813 2368 ntBASIC18.61■□□□□ 0.57
NR1H2P55055 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NR1H2P55055 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NR1H2P55055 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
NR1H2P55055 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NR1H2P55055 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.61■□□□□ 0.57
NR1H2P55055 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NR1H2P55055 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NR1H2P55055 TREX1-205ENST00000625293 1783 ntBASIC18.61■□□□□ 0.57
NR1H2P55055 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NR1H2P55055 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NR1H2P55055 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NR1H2P55055 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
NR1H2P55055 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
NR1H2P55055 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NR1H2P55055 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.61■□□□□ 0.57
NR1H2P55055 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NR1H2P55055 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NR1H2P55055 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NR1H2P55055 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.61■□□□□ 0.57
NR1H2P55055 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.61■□□□□ 0.57
NR1H2P55055 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.61■□□□□ 0.57
NR1H2P55055 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.61■□□□□ 0.57
NR1H2P55055 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
NR1H2P55055 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NR1H2P55055 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NR1H2P55055 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NR1H2P55055 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
NR1H2P55055 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NR1H2P55055 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NR1H2P55055 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
NR1H2P55055 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
NR1H2P55055 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NR1H2P55055 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.6■□□□□ 0.57
NR1H2P55055 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NR1H2P55055 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.6■□□□□ 0.57
NR1H2P55055 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NR1H2P55055 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NR1H2P55055 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.6■□□□□ 0.57
NR1H2P55055 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
NR1H2P55055 AC104187.1-201ENST00000607510 612 ntBASIC18.6■□□□□ 0.57
NR1H2P55055 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NR1H2P55055 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.6■□□□□ 0.57
NR1H2P55055 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NR1H2P55055 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NR1H2P55055 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NR1H2P55055 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NR1H2P55055 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.6■□□□□ 0.57
NR1H2P55055 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NR1H2P55055 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NR1H2P55055 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.6■□□□□ 0.57
NR1H2P55055 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NR1H2P55055 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.6■□□□□ 0.57
NR1H2P55055 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
NR1H2P55055 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NR1H2P55055 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NR1H2P55055 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NR1H2P55055 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NR1H2P55055 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms