Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ATXN3P54252 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.08■□□□□ 0.81
ATXN3P54252 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
ATXN3P54252 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ATXN3P54252 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ATXN3P54252 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.08■□□□□ 0.81
ATXN3P54252 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ATXN3P54252 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.08■□□□□ 0.81
ATXN3P54252 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ATXN3P54252 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
ATXN3P54252 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
ATXN3P54252 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
ATXN3P54252 TSPY15P-201ENST00000457163 923 ntBASIC20.08■□□□□ 0.81
ATXN3P54252 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.08■□□□□ 0.81
ATXN3P54252 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.08■□□□□ 0.81
ATXN3P54252 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.08■□□□□ 0.81
ATXN3P54252 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
ATXN3P54252 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.8
ATXN3P54252 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.08■□□□□ 0.8
ATXN3P54252 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
ATXN3P54252 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATXN3P54252 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ATXN3P54252 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATXN3P54252 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATXN3P54252 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATXN3P54252 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATXN3P54252 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATXN3P54252 RCN1P1-201ENST00000400413 996 ntBASIC20.07■□□□□ 0.8
ATXN3P54252 TMPOP1-202ENST00000424642 1267 ntBASIC20.07■□□□□ 0.8
ATXN3P54252 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.07■□□□□ 0.8
ATXN3P54252 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.07■□□□□ 0.8
ATXN3P54252 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATXN3P54252 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.07■□□□□ 0.8
ATXN3P54252 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATXN3P54252 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.07■□□□□ 0.8
ATXN3P54252 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.07■□□□□ 0.8
ATXN3P54252 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATXN3P54252 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
ATXN3P54252 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.07■□□□□ 0.8
ATXN3P54252 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.07■□□□□ 0.8
ATXN3P54252 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATXN3P54252 AC087633.2-202ENST00000565166 1439 ntBASIC20.07■□□□□ 0.8
ATXN3P54252 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATXN3P54252 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATXN3P54252 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
ATXN3P54252 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATXN3P54252 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.06■□□□□ 0.8
ATXN3P54252 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATXN3P54252 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATXN3P54252 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATXN3P54252 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.06■□□□□ 0.8
ATXN3P54252 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
ATXN3P54252 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATXN3P54252 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
ATXN3P54252 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ATXN3P54252 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATXN3P54252 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATXN3P54252 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
ATXN3P54252 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATXN3P54252 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATXN3P54252 CD177P1-201ENST00000606252 935 ntBASIC20.06■□□□□ 0.8
ATXN3P54252 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
ATXN3P54252 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.06■□□□□ 0.8
ATXN3P54252 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATXN3P54252 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ATXN3P54252 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
ATXN3P54252 AP005212.1-201ENST00000581547 1997 ntBASIC20.06■□□□□ 0.8
ATXN3P54252 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATXN3P54252 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATXN3P54252 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.06■□□□□ 0.8
ATXN3P54252 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATXN3P54252 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATXN3P54252 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN3P54252 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
ATXN3P54252 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.05■□□□□ 0.8
ATXN3P54252 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN3P54252 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
ATXN3P54252 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ATXN3P54252 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN3P54252 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN3P54252 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN3P54252 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN3P54252 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.05■□□□□ 0.8
ATXN3P54252 AC087289.5-201ENST00000586076 3175 ntBASIC20.05■□□□□ 0.8
ATXN3P54252 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN3P54252 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN3P54252 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN3P54252 AL355355.2-201ENST00000442321 338 ntBASIC20.05■□□□□ 0.8
ATXN3P54252 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN3P54252 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ATXN3P54252 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.05■□□□□ 0.8
ATXN3P54252 AC026471.5-201ENST00000615068 467 ntBASIC20.05■□□□□ 0.8
ATXN3P54252 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN3P54252 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN3P54252 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.05■□□□□ 0.8
ATXN3P54252 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN3P54252 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN3P54252 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ATXN3P54252 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.05■□□□□ 0.8
ATXN3P54252 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms