Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CLCN4P51793 AC131212.4-201ENST00000623606 975 ntBASIC20.8■□□□□ 0.92
CLCN4P51793 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CLCN4P51793 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLCN4P51793 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCN4P51793 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.79■□□□□ 0.92
CLCN4P51793 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCN4P51793 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCN4P51793 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCN4P51793 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CLCN4P51793 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLCN4P51793 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCN4P51793 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCN4P51793 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CLCN4P51793 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLCN4P51793 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.79■□□□□ 0.92
CLCN4P51793 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCN4P51793 AC097488.1-201ENST00000507834 756 ntBASIC20.79■□□□□ 0.92
CLCN4P51793 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.79■□□□□ 0.92
CLCN4P51793 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCN4P51793 AC006128.1-201ENST00000624704 1661 ntBASIC20.79■□□□□ 0.92
CLCN4P51793 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCN4P51793 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.78■□□□□ 0.92
CLCN4P51793 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLCN4P51793 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLCN4P51793 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.78■□□□□ 0.92
CLCN4P51793 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLCN4P51793 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLCN4P51793 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLCN4P51793 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.78■□□□□ 0.92
CLCN4P51793 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.78■□□□□ 0.92
CLCN4P51793 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLCN4P51793 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLCN4P51793 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLCN4P51793 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CLCN4P51793 CRYGFP-201ENST00000418459 633 ntBASIC20.78■□□□□ 0.92
CLCN4P51793 LIN28AP1-201ENST00000429574 405 ntBASIC20.78■□□□□ 0.92
CLCN4P51793 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLCN4P51793 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CLCN4P51793 AC006011.2-201ENST00000621313 1158 ntBASIC20.78■□□□□ 0.92
CLCN4P51793 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLCN4P51793 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CLCN4P51793 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN4P51793 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN4P51793 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN4P51793 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN4P51793 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN4P51793 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.77■□□□□ 0.92
CLCN4P51793 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN4P51793 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN4P51793 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN4P51793 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
CLCN4P51793 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN4P51793 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.91
CLCN4P51793 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN4P51793 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN4P51793 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN4P51793 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN4P51793 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.76■□□□□ 0.91
CLCN4P51793 ATP5G1P1-201ENST00000448724 379 ntBASIC20.76■□□□□ 0.91
CLCN4P51793 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.76■□□□□ 0.91
CLCN4P51793 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
CLCN4P51793 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
CLCN4P51793 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN4P51793 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN4P51793 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.76■□□□□ 0.91
CLCN4P51793 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.76■□□□□ 0.91
CLCN4P51793 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.76■□□□□ 0.91
CLCN4P51793 AC007225.1-201ENST00000566331 1836 ntBASIC20.76■□□□□ 0.91
CLCN4P51793 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
CLCN4P51793 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.75■□□□□ 0.91
CLCN4P51793 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN4P51793 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CLCN4P51793 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN4P51793 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN4P51793 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN4P51793 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN4P51793 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CLCN4P51793 AC128688.1-201ENST00000487626 519 ntBASIC20.75■□□□□ 0.91
CLCN4P51793 WWOX-216ENST00000569818 525 ntBASIC20.75■□□□□ 0.91
CLCN4P51793 AC130371.2-201ENST00000619443 611 ntBASIC20.75■□□□□ 0.91
CLCN4P51793 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CLCN4P51793 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.75■□□□□ 0.91
CLCN4P51793 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN4P51793 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN4P51793 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN4P51793 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN4P51793 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.75■□□□□ 0.91
CLCN4P51793 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN4P51793 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN4P51793 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.74■□□□□ 0.91
CLCN4P51793 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CLCN4P51793 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN4P51793 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.74■□□□□ 0.91
CLCN4P51793 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
CLCN4P51793 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.74■□□□□ 0.91
CLCN4P51793 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN4P51793 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN4P51793 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN4P51793 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms