Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CENPAP49450 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CENPAP49450 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CENPAP49450 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.83■□□□□ 0.45
CENPAP49450 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CENPAP49450 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CENPAP49450 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CENPAP49450 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
CENPAP49450 AC068338.2-201ENST00000563278 1430 ntBASIC17.83■□□□□ 0.45
CENPAP49450 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CENPAP49450 AL691432.2-201ENST00000607222 2038 ntBASIC17.83■□□□□ 0.45
CENPAP49450 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CENPAP49450 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CENPAP49450 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.83■□□□□ 0.44
CENPAP49450 AL162430.1-201ENST00000480705 870 ntBASIC17.83■□□□□ 0.44
CENPAP49450 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.83■□□□□ 0.44
CENPAP49450 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CENPAP49450 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CENPAP49450 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CENPAP49450 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.83■□□□□ 0.44
CENPAP49450 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.83■□□□□ 0.44
CENPAP49450 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CENPAP49450 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CENPAP49450 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.83■□□□□ 0.44
CENPAP49450 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CENPAP49450 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CENPAP49450 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.83■□□□□ 0.44
CENPAP49450 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CENPAP49450 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CENPAP49450 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.82■□□□□ 0.44
CENPAP49450 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CENPAP49450 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CENPAP49450 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CENPAP49450 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CENPAP49450 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CENPAP49450 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CENPAP49450 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CENPAP49450 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.82■□□□□ 0.44
CENPAP49450 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.82■□□□□ 0.44
CENPAP49450 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.82■□□□□ 0.44
CENPAP49450 AC007322.1-201ENST00000426983 750 ntBASIC17.82■□□□□ 0.44
CENPAP49450 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.82■□□□□ 0.44
CENPAP49450 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CENPAP49450 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.82■□□□□ 0.44
CENPAP49450 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.82■□□□□ 0.44
CENPAP49450 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CENPAP49450 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
CENPAP49450 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CENPAP49450 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.82■□□□□ 0.44
CENPAP49450 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CENPAP49450 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CENPAP49450 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CENPAP49450 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CENPAP49450 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CENPAP49450 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.81■□□□□ 0.44
CENPAP49450 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CENPAP49450 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CENPAP49450 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CENPAP49450 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.81■□□□□ 0.44
CENPAP49450 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CENPAP49450 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CENPAP49450 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CENPAP49450 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.81■□□□□ 0.44
CENPAP49450 CNN2P6-201ENST00000439038 900 ntBASIC17.81■□□□□ 0.44
CENPAP49450 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.81■□□□□ 0.44
CENPAP49450 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.81■□□□□ 0.44
CENPAP49450 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
CENPAP49450 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
CENPAP49450 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CENPAP49450 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.81■□□□□ 0.44
CENPAP49450 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CENPAP49450 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.81■□□□□ 0.44
CENPAP49450 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CENPAP49450 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.81■□□□□ 0.44
CENPAP49450 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.81■□□□□ 0.44
CENPAP49450 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.81■□□□□ 0.44
CENPAP49450 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CENPAP49450 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.8■□□□□ 0.44
CENPAP49450 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CENPAP49450 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CENPAP49450 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CENPAP49450 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CENPAP49450 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.8■□□□□ 0.44
CENPAP49450 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CENPAP49450 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CENPAP49450 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CENPAP49450 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CENPAP49450 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CENPAP49450 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CENPAP49450 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
CENPAP49450 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CENPAP49450 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CENPAP49450 KRT18P68-201ENST00000392293 1000 ntBASIC17.8■□□□□ 0.44
CENPAP49450 AC006015.1-201ENST00000429970 570 ntBASIC17.8■□□□□ 0.44
CENPAP49450 CYP2T1P-201ENST00000432607 1285 ntBASIC17.8■□□□□ 0.44
CENPAP49450 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CENPAP49450 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CENPAP49450 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.8■□□□□ 0.44
CENPAP49450 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.8■□□□□ 0.44
CENPAP49450 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms