Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RXRGP48443 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RXRGP48443 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RXRGP48443 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RXRGP48443 AL353807.1-201ENST00000427475 662 ntBASIC19.72■□□□□ 0.75
RXRGP48443 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RXRGP48443 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.72■□□□□ 0.75
RXRGP48443 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.72■□□□□ 0.75
RXRGP48443 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RXRGP48443 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
RXRGP48443 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.72■□□□□ 0.75
RXRGP48443 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RXRGP48443 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.72■□□□□ 0.75
RXRGP48443 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RXRGP48443 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.72■□□□□ 0.75
RXRGP48443 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
RXRGP48443 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RXRGP48443 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RXRGP48443 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RXRGP48443 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RXRGP48443 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.71■□□□□ 0.75
RXRGP48443 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RXRGP48443 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RXRGP48443 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.71■□□□□ 0.75
RXRGP48443 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RXRGP48443 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RXRGP48443 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.71■□□□□ 0.75
RXRGP48443 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RXRGP48443 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.71■□□□□ 0.75
RXRGP48443 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RXRGP48443 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.71■□□□□ 0.75
RXRGP48443 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RXRGP48443 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.71■□□□□ 0.75
RXRGP48443 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.71■□□□□ 0.75
RXRGP48443 AF186192.3-201ENST00000583427 947 ntBASIC19.71■□□□□ 0.75
RXRGP48443 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.71■□□□□ 0.75
RXRGP48443 AC026471.5-201ENST00000615068 467 ntBASIC19.71■□□□□ 0.75
RXRGP48443 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.71■□□□□ 0.75
RXRGP48443 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RXRGP48443 NBPF21P-201ENST00000425093 1451 ntBASIC19.71■□□□□ 0.75
RXRGP48443 HTR7P1-201ENST00000538670 1336 ntBASIC19.71■□□□□ 0.75
RXRGP48443 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RXRGP48443 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RXRGP48443 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RXRGP48443 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.7■□□□□ 0.74
RXRGP48443 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RXRGP48443 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RXRGP48443 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RXRGP48443 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RXRGP48443 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RXRGP48443 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RXRGP48443 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RXRGP48443 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RXRGP48443 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.7■□□□□ 0.74
RXRGP48443 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.7■□□□□ 0.74
RXRGP48443 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.7■□□□□ 0.74
RXRGP48443 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
RXRGP48443 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.7■□□□□ 0.74
RXRGP48443 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RXRGP48443 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RXRGP48443 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
RXRGP48443 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RXRGP48443 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.7■□□□□ 0.74
RXRGP48443 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RXRGP48443 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RXRGP48443 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RXRGP48443 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RXRGP48443 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RXRGP48443 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RXRGP48443 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.69■□□□□ 0.74
RXRGP48443 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RXRGP48443 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.69■□□□□ 0.74
RXRGP48443 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.69■□□□□ 0.74
RXRGP48443 AL121906.2-201ENST00000621597 723 ntBASIC19.69■□□□□ 0.74
RXRGP48443 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RXRGP48443 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RXRGP48443 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RXRGP48443 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RXRGP48443 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.69■□□□□ 0.74
RXRGP48443 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.69■□□□□ 0.74
RXRGP48443 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RXRGP48443 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
RXRGP48443 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
RXRGP48443 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RXRGP48443 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.68■□□□□ 0.74
RXRGP48443 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RXRGP48443 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RXRGP48443 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RXRGP48443 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RXRGP48443 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.68■□□□□ 0.74
RXRGP48443 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RXRGP48443 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RXRGP48443 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.68■□□□□ 0.74
RXRGP48443 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.68■□□□□ 0.74
RXRGP48443 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.68■□□□□ 0.74
RXRGP48443 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.68■□□□□ 0.74
RXRGP48443 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.68■□□□□ 0.74
RXRGP48443 AP003071.4-201ENST00000562276 1284 ntBASIC19.68■□□□□ 0.74
RXRGP48443 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.68■□□□□ 0.74
RXRGP48443 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms