Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 CD177P1-201ENST00000606252 935 ntBASIC18.73■□□□□ 0.59
GABRA4P48169 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GABRA4P48169 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.73■□□□□ 0.59
GABRA4P48169 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GABRA4P48169 TMEM179-206ENST00000616017 1645 ntBASIC18.73■□□□□ 0.59
GABRA4P48169 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GABRA4P48169 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
GABRA4P48169 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
GABRA4P48169 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GABRA4P48169 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GABRA4P48169 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GABRA4P48169 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GABRA4P48169 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
GABRA4P48169 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GABRA4P48169 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GABRA4P48169 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.72■□□□□ 0.59
GABRA4P48169 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.72■□□□□ 0.59
GABRA4P48169 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
GABRA4P48169 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GABRA4P48169 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GABRA4P48169 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
GABRA4P48169 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GABRA4P48169 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.72■□□□□ 0.59
GABRA4P48169 FAM197Y1-201ENST00000421178 764 ntBASIC18.72■□□□□ 0.59
GABRA4P48169 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.72■□□□□ 0.59
GABRA4P48169 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GABRA4P48169 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
GABRA4P48169 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
GABRA4P48169 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GABRA4P48169 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.72■□□□□ 0.59
GABRA4P48169 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
GABRA4P48169 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
GABRA4P48169 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
GABRA4P48169 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GABRA4P48169 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
GABRA4P48169 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.71■□□□□ 0.59
GABRA4P48169 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GABRA4P48169 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GABRA4P48169 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GABRA4P48169 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
GABRA4P48169 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GABRA4P48169 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.71■□□□□ 0.59
GABRA4P48169 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GABRA4P48169 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.71■□□□□ 0.59
GABRA4P48169 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.71■□□□□ 0.59
GABRA4P48169 TUBB8P6-201ENST00000436895 1288 ntBASIC18.71■□□□□ 0.59
GABRA4P48169 TSPY15P-201ENST00000457163 923 ntBASIC18.71■□□□□ 0.59
GABRA4P48169 AP002982.1-201ENST00000492365 877 ntBASIC18.71■□□□□ 0.59
GABRA4P48169 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.71■□□□□ 0.59
GABRA4P48169 MIR4785-201ENST00000585005 73 ntBASIC18.71■□□□□ 0.59
GABRA4P48169 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.71■□□□□ 0.59
GABRA4P48169 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GABRA4P48169 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GABRA4P48169 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GABRA4P48169 KRT17P2-201ENST00000300992 1314 ntBASIC18.71■□□□□ 0.59
GABRA4P48169 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.71■□□□□ 0.59
GABRA4P48169 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
GABRA4P48169 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.71■□□□□ 0.59
GABRA4P48169 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.71■□□□□ 0.58
GABRA4P48169 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABRA4P48169 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GABRA4P48169 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABRA4P48169 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GABRA4P48169 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.7■□□□□ 0.58
GABRA4P48169 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABRA4P48169 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.7■□□□□ 0.58
GABRA4P48169 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABRA4P48169 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABRA4P48169 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
GABRA4P48169 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABRA4P48169 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GABRA4P48169 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.7■□□□□ 0.58
GABRA4P48169 KSR1P1-201ENST00000446298 240 ntBASIC18.7■□□□□ 0.58
GABRA4P48169 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.7■□□□□ 0.58
GABRA4P48169 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.7■□□□□ 0.58
GABRA4P48169 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.7■□□□□ 0.58
GABRA4P48169 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GABRA4P48169 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABRA4P48169 AC009237.14-201ENST00000609975 1594 ntBASIC18.7■□□□□ 0.58
GABRA4P48169 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.7■□□□□ 0.58
GABRA4P48169 AC026471.5-201ENST00000615068 467 ntBASIC18.7■□□□□ 0.58
GABRA4P48169 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABRA4P48169 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABRA4P48169 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.7■□□□□ 0.58
GABRA4P48169 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GABRA4P48169 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.7■□□□□ 0.58
GABRA4P48169 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.7■□□□□ 0.58
GABRA4P48169 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABRA4P48169 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GABRA4P48169 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.69■□□□□ 0.58
GABRA4P48169 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GABRA4P48169 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GABRA4P48169 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GABRA4P48169 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.69■□□□□ 0.58
GABRA4P48169 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GABRA4P48169 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.69■□□□□ 0.58
GABRA4P48169 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GABRA4P48169 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GABRA4P48169 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GABRA4P48169 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms