Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MMP13P45452 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.49■□□□□ 0.87
MMP13P45452 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.49■□□□□ 0.87
MMP13P45452 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.49■□□□□ 0.87
MMP13P45452 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MMP13P45452 MYC-209ENST00000641252 345 ntBASIC20.49■□□□□ 0.87
MMP13P45452 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MMP13P45452 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MMP13P45452 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.49■□□□□ 0.87
MMP13P45452 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MMP13P45452 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MMP13P45452 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
MMP13P45452 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MMP13P45452 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.49■□□□□ 0.87
MMP13P45452 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.48■□□□□ 0.87
MMP13P45452 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MMP13P45452 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.48■□□□□ 0.87
MMP13P45452 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
MMP13P45452 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
MMP13P45452 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MMP13P45452 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.48■□□□□ 0.87
MMP13P45452 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MMP13P45452 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MMP13P45452 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.48■□□□□ 0.87
MMP13P45452 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.48■□□□□ 0.87
MMP13P45452 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
MMP13P45452 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.48■□□□□ 0.87
MMP13P45452 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.48■□□□□ 0.87
MMP13P45452 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
MMP13P45452 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MMP13P45452 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MMP13P45452 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.48■□□□□ 0.87
MMP13P45452 PTBP1P-201ENST00000554374 1601 ntBASIC20.48■□□□□ 0.87
MMP13P45452 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MMP13P45452 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
MMP13P45452 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MMP13P45452 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MMP13P45452 AC093484.2-201ENST00000580996 2166 ntBASIC20.47■□□□□ 0.87
MMP13P45452 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MMP13P45452 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
MMP13P45452 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.47■□□□□ 0.87
MMP13P45452 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MMP13P45452 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.47■□□□□ 0.87
MMP13P45452 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.47■□□□□ 0.87
MMP13P45452 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.47■□□□□ 0.87
MMP13P45452 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
MMP13P45452 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
MMP13P45452 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.47■□□□□ 0.87
MMP13P45452 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MMP13P45452 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
MMP13P45452 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.46■□□□□ 0.87
MMP13P45452 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP13P45452 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.46■□□□□ 0.87
MMP13P45452 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
MMP13P45452 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP13P45452 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP13P45452 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.46■□□□□ 0.87
MMP13P45452 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MMP13P45452 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.46■□□□□ 0.87
MMP13P45452 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP13P45452 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP13P45452 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
MMP13P45452 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MMP13P45452 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MMP13P45452 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.46■□□□□ 0.87
MMP13P45452 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.46■□□□□ 0.87
MMP13P45452 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MMP13P45452 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.46■□□□□ 0.87
MMP13P45452 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP13P45452 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MMP13P45452 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MMP13P45452 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
MMP13P45452 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP13P45452 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP13P45452 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP13P45452 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
MMP13P45452 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.45■□□□□ 0.87
MMP13P45452 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MMP13P45452 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP13P45452 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP13P45452 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
MMP13P45452 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.45■□□□□ 0.86
MMP13P45452 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.45■□□□□ 0.86
MMP13P45452 AC083880.1-201ENST00000608266 535 ntBASIC20.45■□□□□ 0.86
MMP13P45452 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
MMP13P45452 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MMP13P45452 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP13P45452 TMEM179-206ENST00000616017 1645 ntBASIC20.45■□□□□ 0.86
MMP13P45452 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.45■□□□□ 0.86
MMP13P45452 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP13P45452 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.45■□□□□ 0.86
MMP13P45452 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
MMP13P45452 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP13P45452 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP13P45452 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP13P45452 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP13P45452 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP13P45452 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
MMP13P45452 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.44■□□□□ 0.86
MMP13P45452 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms