Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
KDM5CP41229 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC29.72■■■□□ 2.35
KDM5CP41229 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC29.72■■■□□ 2.35
KDM5CP41229 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC29.72■■■□□ 2.35
KDM5CP41229 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC29.72■■■□□ 2.35
KDM5CP41229 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
KDM5CP41229 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC29.72■■■□□ 2.35
KDM5CP41229 HCG4P8-203ENST00000443049 980 ntBASIC29.72■■■□□ 2.35
KDM5CP41229 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC29.72■■■□□ 2.35
KDM5CP41229 AC069148.1-201ENST00000608741 768 ntBASIC29.72■■■□□ 2.35
KDM5CP41229 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC29.72■■■□□ 2.35
KDM5CP41229 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC29.72■■■□□ 2.35
KDM5CP41229 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC29.72■■■□□ 2.35
KDM5CP41229 AC018553.1-201ENST00000616682 1458 ntBASIC29.71■■■□□ 2.35
KDM5CP41229 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
KDM5CP41229 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
KDM5CP41229 AL671277.2-201ENST00000458060 996 ntBASIC29.71■■■□□ 2.35
KDM5CP41229 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC29.71■■■□□ 2.35
KDM5CP41229 CD81-212ENST00000526072 1172 ntTSL 5 BASIC29.71■■■□□ 2.35
KDM5CP41229 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC29.71■■■□□ 2.35
KDM5CP41229 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC29.71■■■□□ 2.35
KDM5CP41229 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC29.71■■■□□ 2.35
KDM5CP41229 AC130371.2-201ENST00000619443 611 ntBASIC29.71■■■□□ 2.35
KDM5CP41229 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC29.71■■■□□ 2.35
KDM5CP41229 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
KDM5CP41229 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC29.71■■■□□ 2.35
KDM5CP41229 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC29.71■■■□□ 2.35
KDM5CP41229 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC29.71■■■□□ 2.35
KDM5CP41229 AL121603.2-201ENST00000557373 2117 ntBASIC29.71■■■□□ 2.35
KDM5CP41229 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC29.71■■■□□ 2.35
KDM5CP41229 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
KDM5CP41229 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
KDM5CP41229 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC29.7■■■□□ 2.35
KDM5CP41229 IPPK-202ENST00000375522 882 ntTSL 3 BASIC29.7■■■□□ 2.35
KDM5CP41229 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC29.7■■■□□ 2.35
KDM5CP41229 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
KDM5CP41229 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
KDM5CP41229 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
KDM5CP41229 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC29.7■■■□□ 2.34
KDM5CP41229 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC29.7■■■□□ 2.34
KDM5CP41229 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC29.7■■■□□ 2.34
KDM5CP41229 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC29.69■■■□□ 2.34
KDM5CP41229 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC29.69■■■□□ 2.34
KDM5CP41229 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC29.69■■■□□ 2.34
KDM5CP41229 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC29.69■■■□□ 2.34
KDM5CP41229 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC29.69■■■□□ 2.34
KDM5CP41229 CLEC4GP1-201ENST00000596555 870 ntBASIC29.69■■■□□ 2.34
KDM5CP41229 AC093458.2-201ENST00000623150 629 ntBASIC29.69■■■□□ 2.34
KDM5CP41229 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC29.69■■■□□ 2.34
KDM5CP41229 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
KDM5CP41229 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
KDM5CP41229 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC29.69■■■□□ 2.34
KDM5CP41229 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC29.69■■■□□ 2.34
KDM5CP41229 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC29.69■■■□□ 2.34
KDM5CP41229 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
KDM5CP41229 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC29.68■■■□□ 2.34
KDM5CP41229 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
KDM5CP41229 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
KDM5CP41229 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC29.68■■■□□ 2.34
KDM5CP41229 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC29.68■■■□□ 2.34
KDM5CP41229 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC29.68■■■□□ 2.34
KDM5CP41229 AL441883.1-201ENST00000566170 1045 ntBASIC29.68■■■□□ 2.34
KDM5CP41229 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
KDM5CP41229 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC29.68■■■□□ 2.34
KDM5CP41229 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
KDM5CP41229 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
KDM5CP41229 FBXW4P1-201ENST00000426721 2239 ntBASIC29.67■■■□□ 2.34
KDM5CP41229 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC29.67■■■□□ 2.34
KDM5CP41229 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
KDM5CP41229 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC29.67■■■□□ 2.34
KDM5CP41229 HOMER2P1-201ENST00000455653 964 ntBASIC29.67■■■□□ 2.34
KDM5CP41229 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC29.67■■■□□ 2.34
KDM5CP41229 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC29.67■■■□□ 2.34
KDM5CP41229 AC011558.1-201ENST00000623459 338 ntBASIC29.67■■■□□ 2.34
KDM5CP41229 BID-212ENST00000614949 1988 ntTSL 5 BASIC29.67■■■□□ 2.34
KDM5CP41229 AL049796.1-201ENST00000565336 1766 ntBASIC29.66■■■□□ 2.34
KDM5CP41229 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
KDM5CP41229 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC29.66■■■□□ 2.34
KDM5CP41229 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC29.66■■■□□ 2.34
KDM5CP41229 KRT18P38-201ENST00000449496 1282 ntBASIC29.66■■■□□ 2.34
KDM5CP41229 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC29.66■■■□□ 2.34
KDM5CP41229 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC29.66■■■□□ 2.34
KDM5CP41229 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC29.66■■■□□ 2.34
KDM5CP41229 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC29.66■■■□□ 2.34
KDM5CP41229 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
KDM5CP41229 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC29.65■■■□□ 2.34
KDM5CP41229 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC29.65■■■□□ 2.34
KDM5CP41229 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
KDM5CP41229 Z98882.1-201ENST00000622160 2253 ntBASIC29.65■■■□□ 2.34
KDM5CP41229 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC29.65■■■□□ 2.34
KDM5CP41229 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC29.65■■■□□ 2.34
KDM5CP41229 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC29.65■■■□□ 2.34
KDM5CP41229 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
KDM5CP41229 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
KDM5CP41229 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
KDM5CP41229 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
KDM5CP41229 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC29.65■■■□□ 2.34
KDM5CP41229 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
KDM5CP41229 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
KDM5CP41229 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms