Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GDNFP39905 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GDNFP39905 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
GDNFP39905 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.12■□□□□ 0.33
GDNFP39905 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
GDNFP39905 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GDNFP39905 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GDNFP39905 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GDNFP39905 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
GDNFP39905 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GDNFP39905 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.12■□□□□ 0.33
GDNFP39905 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.12■□□□□ 0.33
GDNFP39905 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.12■□□□□ 0.33
GDNFP39905 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.12■□□□□ 0.33
GDNFP39905 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.12■□□□□ 0.33
GDNFP39905 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.12■□□□□ 0.33
GDNFP39905 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GDNFP39905 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
GDNFP39905 AL032819.2-201ENST00000624543 2162 ntBASIC17.12■□□□□ 0.33
GDNFP39905 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
GDNFP39905 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GDNFP39905 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
GDNFP39905 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
GDNFP39905 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GDNFP39905 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
GDNFP39905 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
GDNFP39905 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.11■□□□□ 0.33
GDNFP39905 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
GDNFP39905 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
GDNFP39905 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.11■□□□□ 0.33
GDNFP39905 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GDNFP39905 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GDNFP39905 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GDNFP39905 MIR935-201ENST00000401179 91 ntBASIC17.11■□□□□ 0.33
GDNFP39905 KRT19P1-201ENST00000405746 1186 ntBASIC17.11■□□□□ 0.33
GDNFP39905 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.11■□□□□ 0.33
GDNFP39905 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GDNFP39905 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.11■□□□□ 0.33
GDNFP39905 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.11■□□□□ 0.33
GDNFP39905 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.11■□□□□ 0.33
GDNFP39905 RARRES2P11-201ENST00000635158 484 ntBASIC17.11■□□□□ 0.33
GDNFP39905 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GDNFP39905 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
GDNFP39905 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GDNFP39905 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GDNFP39905 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
GDNFP39905 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GDNFP39905 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GDNFP39905 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
GDNFP39905 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
GDNFP39905 AC005332.8-201ENST00000622750 2735 ntBASIC17.11■□□□□ 0.33
GDNFP39905 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.11■□□□□ 0.33
GDNFP39905 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GDNFP39905 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GDNFP39905 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDNFP39905 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GDNFP39905 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDNFP39905 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDNFP39905 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDNFP39905 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GDNFP39905 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GDNFP39905 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GDNFP39905 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
GDNFP39905 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GDNFP39905 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
GDNFP39905 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDNFP39905 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.1■□□□□ 0.33
GDNFP39905 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GDNFP39905 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.1■□□□□ 0.33
GDNFP39905 AL162430.1-201ENST00000480705 870 ntBASIC17.1■□□□□ 0.33
GDNFP39905 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.1■□□□□ 0.33
GDNFP39905 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GDNFP39905 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.1■□□□□ 0.33
GDNFP39905 UBE2DNL-204ENST00000602536 740 ntBASIC17.1■□□□□ 0.33
GDNFP39905 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDNFP39905 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
GDNFP39905 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDNFP39905 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDNFP39905 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GDNFP39905 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GDNFP39905 KRT16P2-201ENST00000414673 1423 ntBASIC17.1■□□□□ 0.33
GDNFP39905 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDNFP39905 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
GDNFP39905 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.1■□□□□ 0.33
GDNFP39905 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
GDNFP39905 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
GDNFP39905 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GDNFP39905 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDNFP39905 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDNFP39905 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDNFP39905 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDNFP39905 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GDNFP39905 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDNFP39905 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.1■□□□□ 0.33
GDNFP39905 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.1■□□□□ 0.33
GDNFP39905 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GDNFP39905 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.09■□□□□ 0.33
GDNFP39905 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDNFP39905 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GDNFP39905 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms