Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 LIN28AP1-201ENST00000429574 405 ntBASIC25.09■■□□□ 1.61
COL15A1P39059 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC25.09■■□□□ 1.61
COL15A1P39059 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
COL15A1P39059 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC25.09■■□□□ 1.61
COL15A1P39059 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
COL15A1P39059 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
COL15A1P39059 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL15A1P39059 AC018553.1-201ENST00000616682 1458 ntBASIC25.09■■□□□ 1.61
COL15A1P39059 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
COL15A1P39059 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL15A1P39059 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL15A1P39059 INGX-201ENST00000359239 846 ntBASIC25.08■■□□□ 1.61
COL15A1P39059 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
COL15A1P39059 ATP5G1P1-201ENST00000448724 379 ntBASIC25.08■■□□□ 1.61
COL15A1P39059 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC25.08■■□□□ 1.61
COL15A1P39059 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC25.08■■□□□ 1.61
COL15A1P39059 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
COL15A1P39059 AC097488.1-201ENST00000507834 756 ntBASIC25.08■■□□□ 1.61
COL15A1P39059 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC25.08■■□□□ 1.61
COL15A1P39059 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
COL15A1P39059 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
COL15A1P39059 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
COL15A1P39059 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC25.08■■□□□ 1.61
COL15A1P39059 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
COL15A1P39059 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
COL15A1P39059 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC25.08■■□□□ 1.61
COL15A1P39059 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
COL15A1P39059 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC25.08■■□□□ 1.61
COL15A1P39059 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL15A1P39059 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL15A1P39059 CRYGFP-201ENST00000418459 633 ntBASIC25.07■■□□□ 1.6
COL15A1P39059 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL15A1P39059 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL15A1P39059 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL15A1P39059 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL15A1P39059 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
COL15A1P39059 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
COL15A1P39059 AC092720.2-201ENST00000602388 1665 ntBASIC25.07■■□□□ 1.6
COL15A1P39059 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC25.07■■□□□ 1.6
COL15A1P39059 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
COL15A1P39059 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL15A1P39059 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL15A1P39059 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL15A1P39059 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC25.06■■□□□ 1.6
COL15A1P39059 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
COL15A1P39059 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
COL15A1P39059 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
COL15A1P39059 TUBB8P6-201ENST00000436895 1288 ntBASIC25.06■■□□□ 1.6
COL15A1P39059 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC25.06■■□□□ 1.6
COL15A1P39059 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL15A1P39059 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC25.06■■□□□ 1.6
COL15A1P39059 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC25.06■■□□□ 1.6
COL15A1P39059 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC25.06■■□□□ 1.6
COL15A1P39059 GOLGA6L3-201ENST00000507199 1679 ntBASIC25.06■■□□□ 1.6
COL15A1P39059 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC25.06■■□□□ 1.6
COL15A1P39059 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
COL15A1P39059 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC25.05■■□□□ 1.6
COL15A1P39059 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC25.05■■□□□ 1.6
COL15A1P39059 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL15A1P39059 FDX2-206ENST00000492239 773 ntTSL 2 BASIC25.05■■□□□ 1.6
COL15A1P39059 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL15A1P39059 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC25.05■■□□□ 1.6
COL15A1P39059 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC25.05■■□□□ 1.6
COL15A1P39059 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL15A1P39059 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
COL15A1P39059 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC25.05■■□□□ 1.6
COL15A1P39059 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL15A1P39059 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL15A1P39059 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL15A1P39059 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
COL15A1P39059 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC25.05■■□□□ 1.6
COL15A1P39059 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
COL15A1P39059 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
COL15A1P39059 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC25.05■■□□□ 1.6
COL15A1P39059 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC25.05■■□□□ 1.6
COL15A1P39059 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC25.05■■□□□ 1.6
COL15A1P39059 AC131212.4-201ENST00000623606 975 ntBASIC25.05■■□□□ 1.6
COL15A1P39059 ME2-216ENST00000639850 2331 ntTSL 5 BASIC25.04■■□□□ 1.6
COL15A1P39059 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
COL15A1P39059 RCC2P6-201ENST00000526625 1557 ntBASIC25.04■■□□□ 1.6
COL15A1P39059 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
COL15A1P39059 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
COL15A1P39059 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
COL15A1P39059 KRT16P6-202ENST00000425692 1426 ntBASIC25.04■■□□□ 1.6
COL15A1P39059 EFS-203ENST00000429593 2610 ntTSL 2 BASIC25.04■■□□□ 1.6
COL15A1P39059 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL15A1P39059 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL15A1P39059 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC25.04■■□□□ 1.6
COL15A1P39059 AC128688.1-201ENST00000487626 519 ntBASIC25.04■■□□□ 1.6
COL15A1P39059 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC25.04■■□□□ 1.6
COL15A1P39059 AC022616.7-201ENST00000525383 220 ntBASIC25.04■■□□□ 1.6
COL15A1P39059 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC25.04■■□□□ 1.6
COL15A1P39059 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
COL15A1P39059 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL15A1P39059 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL15A1P39059 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC25.03■■□□□ 1.6
COL15A1P39059 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL15A1P39059 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL15A1P39059 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC25.03■■□□□ 1.6
COL15A1P39059 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms