Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCKBRP32239 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCKBRP32239 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCKBRP32239 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCKBRP32239 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCKBRP32239 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCKBRP32239 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.95■□□□□ 0.62
CCKBRP32239 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCKBRP32239 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCKBRP32239 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCKBRP32239 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.95■□□□□ 0.62
CCKBRP32239 AC026271.3-201ENST00000571884 352 ntBASIC18.95■□□□□ 0.62
CCKBRP32239 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.95■□□□□ 0.62
CCKBRP32239 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCKBRP32239 AL031985.4-201ENST00000642138 673 ntBASIC18.95■□□□□ 0.62
CCKBRP32239 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.95■□□□□ 0.62
CCKBRP32239 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCKBRP32239 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCKBRP32239 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.95■□□□□ 0.62
CCKBRP32239 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCKBRP32239 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCKBRP32239 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCKBRP32239 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCKBRP32239 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.94■□□□□ 0.62
CCKBRP32239 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCKBRP32239 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.94■□□□□ 0.62
CCKBRP32239 AC005521.1-201ENST00000393351 872 ntBASIC18.94■□□□□ 0.62
CCKBRP32239 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCKBRP32239 KRT18P35-201ENST00000510488 1269 ntBASIC18.94■□□□□ 0.62
CCKBRP32239 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.94■□□□□ 0.62
CCKBRP32239 AL049597.2-201ENST00000565575 961 ntBASIC18.94■□□□□ 0.62
CCKBRP32239 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCKBRP32239 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCKBRP32239 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCKBRP32239 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCKBRP32239 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCKBRP32239 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCKBRP32239 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCKBRP32239 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.93■□□□□ 0.62
CCKBRP32239 CYP2D8P-201ENST00000433633 1490 ntBASIC18.93■□□□□ 0.62
CCKBRP32239 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCKBRP32239 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCKBRP32239 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.93■□□□□ 0.62
CCKBRP32239 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCKBRP32239 AL390955.1-201ENST00000428694 934 ntBASIC18.93■□□□□ 0.62
CCKBRP32239 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.93■□□□□ 0.62
CCKBRP32239 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.93■□□□□ 0.62
CCKBRP32239 AL445675.2-201ENST00000620291 557 ntBASIC18.93■□□□□ 0.62
CCKBRP32239 AC010947.1-201ENST00000623454 693 ntBASIC18.93■□□□□ 0.62
CCKBRP32239 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCKBRP32239 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.93■□□□□ 0.62
CCKBRP32239 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.93■□□□□ 0.62
CCKBRP32239 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCKBRP32239 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCKBRP32239 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCKBRP32239 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCKBRP32239 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CCKBRP32239 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.93■□□□□ 0.62
CCKBRP32239 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCKBRP32239 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCKBRP32239 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.92■□□□□ 0.62
CCKBRP32239 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCKBRP32239 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCKBRP32239 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCKBRP32239 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.92■□□□□ 0.62
CCKBRP32239 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.92■□□□□ 0.62
CCKBRP32239 FSCN1P1-201ENST00000568912 1481 ntBASIC18.92■□□□□ 0.62
CCKBRP32239 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.92■□□□□ 0.62
CCKBRP32239 PLK5-205ENST00000642079 1969 ntBASIC18.92■□□□□ 0.62
CCKBRP32239 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCKBRP32239 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCKBRP32239 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCKBRP32239 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCKBRP32239 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.92■□□□□ 0.62
CCKBRP32239 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.92■□□□□ 0.62
CCKBRP32239 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCKBRP32239 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCKBRP32239 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCKBRP32239 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCKBRP32239 AC116351.2-201ENST00000606540 1585 ntBASIC18.92■□□□□ 0.62
CCKBRP32239 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
CCKBRP32239 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CCKBRP32239 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCKBRP32239 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CCKBRP32239 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCKBRP32239 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCKBRP32239 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CCKBRP32239 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCKBRP32239 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
CCKBRP32239 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCKBRP32239 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.91■□□□□ 0.62
CCKBRP32239 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.91■□□□□ 0.62
CCKBRP32239 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.91■□□□□ 0.62
CCKBRP32239 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCKBRP32239 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.91■□□□□ 0.62
CCKBRP32239 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.91■□□□□ 0.62
CCKBRP32239 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCKBRP32239 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCKBRP32239 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCKBRP32239 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 231.9 ms