Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 AHSA1-211ENST00000556866 432 ntTSL 20.34□□□□□ -2.364e-6■■■■□ 22.8
RPS3P23396 RFESD-204ENST00000504893 757 ntTSL 30.12□□□□□ -2.394e-6■■■■□ 22.8
RPS3P23396 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.753e-52■■■■□ 22.7
RPS3P23396 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.653e-52■■■■□ 22.7
RPS3P23396 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.32■□□□□ 0.23e-52■■■■□ 22.7
RPS3P23396 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.13e-52■■■■□ 22.7
RPS3P23396 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.073e-52■■■■□ 22.7
RPS3P23396 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.043e-52■■■■□ 22.7
RPS3P23396 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.043e-52■■■■□ 22.7
RPS3P23396 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.55□□□□□ -0.083e-52■■■■□ 22.7
RPS3P23396 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.213e-52■■■■□ 22.7
RPS3P23396 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.213e-52■■■■□ 22.7
RPS3P23396 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC13.43□□□□□ -0.263e-52■■■■□ 22.7
RPS3P23396 ALDOA-211ENST00000564521 2534 ntTSL 512.84□□□□□ -0.353e-52■■■■□ 22.7
RPS3P23396 TSPAN14-204ENST00000372157 855 ntTSL 519.43■□□□□ 0.71e-8■■■■□ 22.7
RPS3P23396 TSPAN14-208ENST00000469149 959 ntTSL 217.43■□□□□ 0.381e-8■■■■□ 22.7
RPS3P23396 ECE1-206ENST00000463334 507 ntTSL 322.92■■□□□ 1.265e-11■■■■□ 22.7
RPS3P23396 ECE1-210ENST00000526194 2172 ntTSL 1 (best)19.2■□□□□ 0.665e-11■■■■□ 22.7
RPS3P23396 ECE1-209ENST00000481130 578 ntTSL 415.95■□□□□ 0.145e-11■■■■□ 22.7
RPS3P23396 ECE1-208ENST00000473505 674 ntTSL 315.06■□□□□ 05e-11■■■■□ 22.7
RPS3P23396 ECE1-211ENST00000527991 580 ntTSL 414.58□□□□□ -0.085e-11■■■■□ 22.7
RPS3P23396 CLSTN3-207ENST00000537408 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.74e-7■■■■□ 22.7
RPS3P23396 FBL-210ENST00000599159 1400 ntTSL 1 (best)21.53■■□□□ 1.049e-18■■■■□ 22.7
RPS3P23396 FBL-211ENST00000601274 877 ntTSL 520.96■□□□□ 0.953e-7■■■■□ 22.7
RPS3P23396 FBL-203ENST00000594309 603 ntTSL 220.96■□□□□ 0.959e-18■■■■□ 22.7
RPS3P23396 FBL-209ENST00000599134 500 ntTSL 519.67■□□□□ 0.749e-18■■■■□ 22.7
RPS3P23396 FBL-208ENST00000598417 581 ntTSL 518.01■□□□□ 0.474e-7■■■■□ 22.7
RPS3P23396 FBL-207ENST00000597634 726 ntTSL 514.6□□□□□ -0.073e-7■■■■□ 22.7
RPS3P23396 RPP21-229ENST00000498414 1492 ntTSL 523.3■■□□□ 1.326e-7■■■■□ 22.7
RPS3P23396 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.94■■□□□ 1.16e-7■■■■□ 22.7
RPS3P23396 RPP21-226ENST00000473266 621 ntTSL 520.72■□□□□ 0.916e-7■■■■□ 22.7
RPS3P23396 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.156e-7■■■■□ 22.7
RPS3P23396 RPP21-228ENST00000491477 457 ntTSL 515.97■□□□□ 0.156e-7■■■■□ 22.7
RPS3P23396 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.97■□□□□ 0.156e-7■■■■□ 22.7
RPS3P23396 TRIM39-RPP21-201ENST00000623385 1698 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.346e-7■■■■□ 22.7
RPS3P23396 RPP21-223ENST00000436442 522 ntTSL 1 (best) BASIC9.19□□□□□ -0.946e-7■■■■□ 22.7
RPS3P23396 RPP21-227ENST00000489124 450 ntTSL 34.98□□□□□ -1.616e-7■■■■□ 22.7
RPS3P23396 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.064e-12■■■■□ 22.7
RPS3P23396 SLC2A1-205ENST00000475162 598 ntTSL 513.49□□□□□ -0.252e-18■■■■□ 22.7
RPS3P23396 C2orf82-205ENST00000449331 466 ntTSL 322.04■■□□□ 1.122e-9■■■■□ 22.7
RPS3P23396 C2orf82-206ENST00000467665 2782 ntTSL 1 (best)18.84■□□□□ 0.612e-9■■■■□ 22.7
RPS3P23396 DCAF7-202ENST00000431926 1354 ntTSL 1 (best)14.34□□□□□ -0.113e-11■■■■□ 22.7
RPS3P23396 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC13.72□□□□□ -0.213e-11■■■■□ 22.7
RPS3P23396 DCAF7-205ENST00000614556 6340 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.763e-11■■■■□ 22.7
RPS3P23396 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.691e-9■■■■□ 22.7
RPS3P23396 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.711e-9■■■■□ 22.7
RPS3P23396 COX4I1-215ENST00000568339 2271 ntTSL 216.59■□□□□ 0.251e-9■■■■□ 22.7
RPS3P23396 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.231e-9■■■■□ 22.7
RPS3P23396 COX4I1-206ENST00000564544 617 ntTSL 312.86□□□□□ -0.351e-9■■■■□ 22.7
RPS3P23396 NANS-204ENST00000461452 3027 ntTSL 210.99□□□□□ -0.652e-8■■■■□ 22.7
RPS3P23396 CHCHD10-203ENST00000517886 494 ntTSL 319.59■□□□□ 0.731e-6■■■■□ 22.7
RPS3P23396 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.731e-6■■■■□ 22.7
RPS3P23396 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.45■□□□□ 0.541e-6■■■■□ 22.7
RPS3P23396 CHCHD10-204ENST00000520222 384 ntTSL 3 BASIC12.97□□□□□ -0.331e-6■■■■□ 22.7
RPS3P23396 DUT-211ENST00000561350 201 ntTSL 21.58□□□□□ -2.161e-7■■■■□ 22.7
RPS3P23396 PGD-205ENST00000483936 680 ntTSL 511.3□□□□□ -0.61e-7■■■■□ 22.7
RPS3P23396 DCAF7-206ENST00000615512 751 ntTSL 514.92□□□□□ -0.024e-7■■■■□ 22.7
RPS3P23396 SERPINF1-206ENST00000571870 739 ntTSL 214.61□□□□□ -0.071e-22■■■■□ 22.6
RPS3P23396 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.278e-7■■■■□ 22.6
RPS3P23396 ALDH4A1-203ENST00000432718 844 ntTSL 315.72■□□□□ 0.111e-6■■■■□ 22.6
RPS3P23396 WBP2-206ENST00000587374 480 ntTSL 410.82□□□□□ -0.682e-7■■■■□ 22.6
RPS3P23396 WBP2-218ENST00000593002 610 ntTSL 410.22□□□□□ -0.772e-7■■■■□ 22.6
RPS3P23396 IDH3B-209ENST00000488299 1620 ntTSL 217.13■□□□□ 0.331e-6■■■■□ 22.6
RPS3P23396 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.311e-6■■■■□ 22.6
RPS3P23396 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.11e-6■■■■□ 22.6
RPS3P23396 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.041e-6■■■■□ 22.6
RPS3P23396 APP-211ENST00000462267 667 ntTSL 214.19□□□□□ -0.145e-17■■■■□ 22.6
RPS3P23396 MSN-201ENST00000360270 3944 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.084e-8■■■■□ 22.6
RPS3P23396 CTSH-217ENST00000534533 836 ntTSL 39.94□□□□□ -0.827e-7■■■■□ 22.6
RPS3P23396 HK2-202ENST00000409174 5278 ntTSL 1 (best) BASIC10.63□□□□□ -0.716e-7■■■■□ 22.6
RPS3P23396 TCAF1-204ENST00000478172 576 ntTSL 49.98□□□□□ -0.817e-16■■■■□ 22.6
RPS3P23396 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.23■■□□□ 1.313e-7■■■■□ 22.6
RPS3P23396 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.223e-7■■■■□ 22.6
RPS3P23396 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.223e-7■■■■□ 22.6
RPS3P23396 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.083e-7■■■■□ 22.6
RPS3P23396 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.59■■□□□ 1.053e-7■■■■□ 22.6
RPS3P23396 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.013e-7■■■■□ 22.6
RPS3P23396 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.73e-7■■■■□ 22.6
RPS3P23396 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.343e-7■■■■□ 22.6
RPS3P23396 PSMD4-211ENST00000476855 1232 ntTSL 215.69■□□□□ 0.18e-10■■■■□ 22.6
RPS3P23396 HPN-209ENST00000600675 551 ntTSL 422.02■■□□□ 1.127e-8■■■■□ 22.6
RPS3P23396 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.087e-8■■■■□ 22.6
RPS3P23396 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.19■□□□□ 0.982e-6■■■■□ 22.6
RPS3P23396 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.982e-6■■■■□ 22.6
RPS3P23396 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.522e-6■■■■□ 22.6
RPS3P23396 REEP6-202ENST00000395479 739 ntAPPRIS ALT2 TSL 317.83■□□□□ 0.447e-8■■■■□ 22.6
RPS3P23396 ITGB2-209ENST00000475170 2125 ntTSL 216.54■□□□□ 0.247e-8■■■■□ 22.6
RPS3P23396 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.2■□□□□ 0.182e-6■■■■□ 22.6
RPS3P23396 G6PC3-205ENST00000590253 844 ntTSL 515.61■□□□□ 0.091e-11■■■■□ 22.6
RPS3P23396 HPN-205ENST00000596662 584 ntTSL 415.18■□□□□ 0.027e-8■■■■□ 22.6
RPS3P23396 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.95□□□□□ -0.027e-8■■■■□ 22.6
RPS3P23396 VMP1-206ENST00000587945 583 ntTSL 313.76□□□□□ -0.214e-6■■■■□ 22.6
RPS3P23396 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.274e-6■■■■□ 22.6
RPS3P23396 ATP13A1-210ENST00000491221 937 ntTSL 213.05□□□□□ -0.327e-8■■■■□ 22.6
RPS3P23396 REEP6-203ENST00000395484 611 ntTSL 511.52□□□□□ -0.577e-8■■■■□ 22.6
RPS3P23396 FAM96B-205ENST00000568572 446 ntTSL 510.95□□□□□ -0.667e-8■■■■□ 22.6
RPS3P23396 TIMM17B-203ENST00000464663 726 ntTSL 29.75□□□□□ -0.857e-8■■■■□ 22.6
RPS3P23396 VMP1-213ENST00000591877 791 ntTSL 37.16□□□□□ -1.264e-6■■■■□ 22.6
RPS3P23396 VMP1-215ENST00000592619 838 ntTSL 54.51□□□□□ -1.694e-6■■■■□ 22.6
RPS3P23396 CAP1-211ENST00000421589 824 ntTSL 215.59■□□□□ 0.095e-7■■■■□ 22.6
Retrieved 100 of 24,271 protein–RNA pairs in 148.5 ms