Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CAPN3P20807 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN3P20807 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN3P20807 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN3P20807 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.94■□□□□ 0.62
CAPN3P20807 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN3P20807 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CAPN3P20807 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CAPN3P20807 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN3P20807 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CAPN3P20807 SLC29A4P1-201ENST00000398760 971 ntBASIC18.94■□□□□ 0.62
CAPN3P20807 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.94■□□□□ 0.62
CAPN3P20807 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.94■□□□□ 0.62
CAPN3P20807 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.94■□□□□ 0.62
CAPN3P20807 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.94■□□□□ 0.62
CAPN3P20807 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN3P20807 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN3P20807 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CAPN3P20807 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN3P20807 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.94■□□□□ 0.62
CAPN3P20807 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN3P20807 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN3P20807 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN3P20807 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.94■□□□□ 0.62
CAPN3P20807 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN3P20807 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN3P20807 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CAPN3P20807 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN3P20807 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN3P20807 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN3P20807 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN3P20807 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CAPN3P20807 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CAPN3P20807 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.93■□□□□ 0.62
CAPN3P20807 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN3P20807 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
CAPN3P20807 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.93■□□□□ 0.62
CAPN3P20807 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CAPN3P20807 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN3P20807 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN3P20807 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.93■□□□□ 0.62
CAPN3P20807 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN3P20807 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.93■□□□□ 0.62
CAPN3P20807 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.93■□□□□ 0.62
CAPN3P20807 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.93■□□□□ 0.62
CAPN3P20807 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.93■□□□□ 0.62
CAPN3P20807 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN3P20807 AL591742.1-201ENST00000604433 565 ntBASIC18.93■□□□□ 0.62
CAPN3P20807 AC016405.3-201ENST00000607710 860 ntBASIC18.93■□□□□ 0.62
CAPN3P20807 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.93■□□□□ 0.62
CAPN3P20807 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN3P20807 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN3P20807 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN3P20807 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN3P20807 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.93■□□□□ 0.62
CAPN3P20807 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CAPN3P20807 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN3P20807 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN3P20807 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN3P20807 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN3P20807 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN3P20807 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.92■□□□□ 0.62
CAPN3P20807 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CAPN3P20807 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.92■□□□□ 0.62
CAPN3P20807 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN3P20807 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN3P20807 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CAPN3P20807 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN3P20807 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CAPN3P20807 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN3P20807 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN3P20807 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN3P20807 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN3P20807 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN3P20807 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN3P20807 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN3P20807 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.92■□□□□ 0.62
CAPN3P20807 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN3P20807 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN3P20807 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN3P20807 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN3P20807 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.92■□□□□ 0.62
CAPN3P20807 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN3P20807 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN3P20807 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN3P20807 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN3P20807 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.91■□□□□ 0.62
CAPN3P20807 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN3P20807 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CAPN3P20807 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CAPN3P20807 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.91■□□□□ 0.62
CAPN3P20807 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN3P20807 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
CAPN3P20807 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN3P20807 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN3P20807 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN3P20807 TERF1P5-201ENST00000477545 1207 ntBASIC18.91■□□□□ 0.62
CAPN3P20807 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.91■□□□□ 0.62
CAPN3P20807 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CAPN3P20807 AL031963.3-201ENST00000606441 850 ntBASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms