Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CTLA4P16410 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTLA4P16410 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.49■□□□□ 0.39
CTLA4P16410 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.49■□□□□ 0.39
CTLA4P16410 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.49■□□□□ 0.39
CTLA4P16410 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTLA4P16410 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.49■□□□□ 0.39
CTLA4P16410 AC005829.2-201ENST00000571422 1056 ntBASIC17.49■□□□□ 0.39
CTLA4P16410 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.49■□□□□ 0.39
CTLA4P16410 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CTLA4P16410 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.49■□□□□ 0.39
CTLA4P16410 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CTLA4P16410 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CTLA4P16410 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CTLA4P16410 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTLA4P16410 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.49■□□□□ 0.39
CTLA4P16410 AC116351.2-201ENST00000606540 1585 ntBASIC17.49■□□□□ 0.39
CTLA4P16410 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTLA4P16410 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTLA4P16410 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTLA4P16410 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTLA4P16410 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTLA4P16410 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTLA4P16410 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTLA4P16410 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.48■□□□□ 0.39
CTLA4P16410 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTLA4P16410 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
CTLA4P16410 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CTLA4P16410 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTLA4P16410 AL390719.1-204ENST00000412397 1219 ntBASIC17.48■□□□□ 0.39
CTLA4P16410 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.48■□□□□ 0.39
CTLA4P16410 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.48■□□□□ 0.39
CTLA4P16410 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.48■□□□□ 0.39
CTLA4P16410 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.48■□□□□ 0.39
CTLA4P16410 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CTLA4P16410 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTLA4P16410 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTLA4P16410 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.48■□□□□ 0.39
CTLA4P16410 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
CTLA4P16410 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTLA4P16410 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.48■□□□□ 0.39
CTLA4P16410 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CTLA4P16410 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTLA4P16410 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.47■□□□□ 0.39
CTLA4P16410 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTLA4P16410 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.47■□□□□ 0.39
CTLA4P16410 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTLA4P16410 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CTLA4P16410 AC087289.5-201ENST00000586076 3175 ntBASIC17.47■□□□□ 0.39
CTLA4P16410 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.47■□□□□ 0.39
CTLA4P16410 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTLA4P16410 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
CTLA4P16410 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTLA4P16410 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTLA4P16410 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTLA4P16410 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.47■□□□□ 0.39
CTLA4P16410 AC073210.2-201ENST00000430369 194 ntBASIC17.47■□□□□ 0.39
CTLA4P16410 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTLA4P16410 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.47■□□□□ 0.39
CTLA4P16410 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.47■□□□□ 0.39
CTLA4P16410 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.47■□□□□ 0.39
CTLA4P16410 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CTLA4P16410 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTLA4P16410 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.47■□□□□ 0.39
CTLA4P16410 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTLA4P16410 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTLA4P16410 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTLA4P16410 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTLA4P16410 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.47■□□□□ 0.39
CTLA4P16410 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTLA4P16410 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTLA4P16410 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CTLA4P16410 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTLA4P16410 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.46■□□□□ 0.39
CTLA4P16410 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CTLA4P16410 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CTLA4P16410 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTLA4P16410 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.46■□□□□ 0.39
CTLA4P16410 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTLA4P16410 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTLA4P16410 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.46■□□□□ 0.39
CTLA4P16410 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CTLA4P16410 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.46■□□□□ 0.39
CTLA4P16410 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.46■□□□□ 0.39
CTLA4P16410 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTLA4P16410 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.46■□□□□ 0.39
CTLA4P16410 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.46■□□□□ 0.39
CTLA4P16410 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CTLA4P16410 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.46■□□□□ 0.39
CTLA4P16410 AC092666.2-201ENST00000613287 246 ntBASIC17.46■□□□□ 0.39
CTLA4P16410 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTLA4P16410 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.46■□□□□ 0.39
CTLA4P16410 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTLA4P16410 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.46■□□□□ 0.39
CTLA4P16410 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.46■□□□□ 0.39
CTLA4P16410 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTLA4P16410 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CTLA4P16410 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTLA4P16410 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CTLA4P16410 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms