Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CSB-PGBD3P0DP91 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CSB-PGBD3P0DP91 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC26.21■■□□□ 1.79
CSB-PGBD3P0DP91 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CSB-PGBD3P0DP91 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CSB-PGBD3P0DP91 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CSB-PGBD3P0DP91 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CSB-PGBD3P0DP91 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC26.21■■□□□ 1.79
CSB-PGBD3P0DP91 AC004951.3-201ENST00000418645 1148 ntBASIC26.21■■□□□ 1.79
CSB-PGBD3P0DP91 ISCU-203ENST00000431221 799 ntTSL 2 BASIC26.21■■□□□ 1.79
CSB-PGBD3P0DP91 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC26.21■■□□□ 1.79
CSB-PGBD3P0DP91 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC26.21■■□□□ 1.79
CSB-PGBD3P0DP91 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC26.21■■□□□ 1.79
CSB-PGBD3P0DP91 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC26.21■■□□□ 1.79
CSB-PGBD3P0DP91 METTL23-204ENST00000586752 904 ntTSL 2 BASIC26.21■■□□□ 1.79
CSB-PGBD3P0DP91 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC26.21■■□□□ 1.79
CSB-PGBD3P0DP91 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
CSB-PGBD3P0DP91 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
CSB-PGBD3P0DP91 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CSB-PGBD3P0DP91 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC26.2■■□□□ 1.79
CSB-PGBD3P0DP91 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CSB-PGBD3P0DP91 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CSB-PGBD3P0DP91 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CSB-PGBD3P0DP91 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CSB-PGBD3P0DP91 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.78
CSB-PGBD3P0DP91 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CSB-PGBD3P0DP91 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CSB-PGBD3P0DP91 RNF152P1-201ENST00000397754 604 ntBASIC26.2■■□□□ 1.78
CSB-PGBD3P0DP91 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC26.2■■□□□ 1.78
CSB-PGBD3P0DP91 FAM207BP-201ENST00000447172 505 ntBASIC26.2■■□□□ 1.78
CSB-PGBD3P0DP91 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
CSB-PGBD3P0DP91 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CSB-PGBD3P0DP91 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC26.2■■□□□ 1.78
CSB-PGBD3P0DP91 GPX4-207ENST00000589115 812 ntTSL 2 BASIC26.2■■□□□ 1.78
CSB-PGBD3P0DP91 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC26.2■■□□□ 1.78
CSB-PGBD3P0DP91 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC26.2■■□□□ 1.78
CSB-PGBD3P0DP91 HLA-A-209ENST00000638375 975 ntBASIC26.2■■□□□ 1.78
CSB-PGBD3P0DP91 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
CSB-PGBD3P0DP91 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CSB-PGBD3P0DP91 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CSB-PGBD3P0DP91 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CSB-PGBD3P0DP91 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC26.2■■□□□ 1.78
CSB-PGBD3P0DP91 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CSB-PGBD3P0DP91 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC26.19■■□□□ 1.78
CSB-PGBD3P0DP91 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CSB-PGBD3P0DP91 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
CSB-PGBD3P0DP91 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CSB-PGBD3P0DP91 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CSB-PGBD3P0DP91 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC26.19■■□□□ 1.78
CSB-PGBD3P0DP91 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CSB-PGBD3P0DP91 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CSB-PGBD3P0DP91 CCR12P-201ENST00000446203 998 ntBASIC26.19■■□□□ 1.78
CSB-PGBD3P0DP91 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC26.19■■□□□ 1.78
CSB-PGBD3P0DP91 AC091390.4-202ENST00000476426 537 ntBASIC26.19■■□□□ 1.78
CSB-PGBD3P0DP91 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CSB-PGBD3P0DP91 AL138966.2-201ENST00000621997 464 ntBASIC26.19■■□□□ 1.78
CSB-PGBD3P0DP91 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
CSB-PGBD3P0DP91 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CSB-PGBD3P0DP91 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CSB-PGBD3P0DP91 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
CSB-PGBD3P0DP91 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CSB-PGBD3P0DP91 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC26.18■■□□□ 1.78
CSB-PGBD3P0DP91 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CSB-PGBD3P0DP91 FAM8A6P-201ENST00000407496 1135 ntBASIC26.18■■□□□ 1.78
CSB-PGBD3P0DP91 SAPCD2P2-201ENST00000431719 1174 ntBASIC26.18■■□□□ 1.78
CSB-PGBD3P0DP91 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC26.18■■□□□ 1.78
CSB-PGBD3P0DP91 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CSB-PGBD3P0DP91 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CSB-PGBD3P0DP91 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CSB-PGBD3P0DP91 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC26.18■■□□□ 1.78
CSB-PGBD3P0DP91 EP400NL-214ENST00000641289 2402 ntBASIC26.18■■□□□ 1.78
CSB-PGBD3P0DP91 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CSB-PGBD3P0DP91 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CSB-PGBD3P0DP91 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CSB-PGBD3P0DP91 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CSB-PGBD3P0DP91 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CSB-PGBD3P0DP91 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
CSB-PGBD3P0DP91 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
CSB-PGBD3P0DP91 AL031133.1-201ENST00000406807 723 ntBASIC26.17■■□□□ 1.78
CSB-PGBD3P0DP91 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
CSB-PGBD3P0DP91 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
CSB-PGBD3P0DP91 AC092647.4-201ENST00000457211 535 ntBASIC26.17■■□□□ 1.78
CSB-PGBD3P0DP91 YBX1P2-201ENST00000489612 999 ntBASIC26.17■■□□□ 1.78
CSB-PGBD3P0DP91 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC26.17■■□□□ 1.78
CSB-PGBD3P0DP91 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC26.17■■□□□ 1.78
CSB-PGBD3P0DP91 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
CSB-PGBD3P0DP91 AF106564.1-201ENST00000607058 2553 ntBASIC26.17■■□□□ 1.78
CSB-PGBD3P0DP91 PHGDH-210ENST00000641115 1638 ntBASIC26.17■■□□□ 1.78
CSB-PGBD3P0DP91 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC26.17■■□□□ 1.78
CSB-PGBD3P0DP91 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
CSB-PGBD3P0DP91 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
CSB-PGBD3P0DP91 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
CSB-PGBD3P0DP91 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC26.16■■□□□ 1.78
CSB-PGBD3P0DP91 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC26.16■■□□□ 1.78
CSB-PGBD3P0DP91 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CSB-PGBD3P0DP91 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CSB-PGBD3P0DP91 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC26.16■■□□□ 1.78
CSB-PGBD3P0DP91 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
CSB-PGBD3P0DP91 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
CSB-PGBD3P0DP91 CLN6-204ENST00000564752 900 ntTSL 3 BASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms