Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
UBCP0CG48 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
UBCP0CG48 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBCP0CG48 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UBCP0CG48 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UBCP0CG48 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBCP0CG48 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.26■□□□□ 0.35
UBCP0CG48 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UBCP0CG48 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBCP0CG48 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.26■□□□□ 0.35
UBCP0CG48 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
UBCP0CG48 CNN2P6-201ENST00000439038 900 ntBASIC17.26■□□□□ 0.35
UBCP0CG48 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.26■□□□□ 0.35
UBCP0CG48 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.26■□□□□ 0.35
UBCP0CG48 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.26■□□□□ 0.35
UBCP0CG48 AC008694.1-202ENST00000636953 945 ntBASIC17.26■□□□□ 0.35
UBCP0CG48 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
UBCP0CG48 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBCP0CG48 Z82202.1-201ENST00000623446 1880 ntBASIC17.26■□□□□ 0.35
UBCP0CG48 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UBCP0CG48 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
UBCP0CG48 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.26■□□□□ 0.35
UBCP0CG48 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBCP0CG48 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBCP0CG48 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBCP0CG48 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.26■□□□□ 0.35
UBCP0CG48 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
UBCP0CG48 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBCP0CG48 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBCP0CG48 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.25■□□□□ 0.35
UBCP0CG48 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBCP0CG48 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
UBCP0CG48 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBCP0CG48 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBCP0CG48 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBCP0CG48 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBCP0CG48 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBCP0CG48 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBCP0CG48 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
UBCP0CG48 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBCP0CG48 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBCP0CG48 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
UBCP0CG48 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBCP0CG48 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.25■□□□□ 0.35
UBCP0CG48 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.25■□□□□ 0.35
UBCP0CG48 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.25■□□□□ 0.35
UBCP0CG48 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.25■□□□□ 0.35
UBCP0CG48 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.25■□□□□ 0.35
UBCP0CG48 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.25■□□□□ 0.35
UBCP0CG48 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.25■□□□□ 0.35
UBCP0CG48 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBCP0CG48 CYP2T3P-201ENST00000601990 817 ntBASIC17.25■□□□□ 0.35
UBCP0CG48 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.25■□□□□ 0.35
UBCP0CG48 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBCP0CG48 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBCP0CG48 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
UBCP0CG48 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBCP0CG48 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
UBCP0CG48 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBCP0CG48 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
UBCP0CG48 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBCP0CG48 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBCP0CG48 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBCP0CG48 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBCP0CG48 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBCP0CG48 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBCP0CG48 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.24■□□□□ 0.35
UBCP0CG48 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBCP0CG48 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBCP0CG48 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.24■□□□□ 0.35
UBCP0CG48 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.24■□□□□ 0.35
UBCP0CG48 CYP2T1P-201ENST00000432607 1285 ntBASIC17.24■□□□□ 0.35
UBCP0CG48 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.24■□□□□ 0.35
UBCP0CG48 DUX4L16-201ENST00000555130 1264 ntBASIC17.24■□□□□ 0.35
UBCP0CG48 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.24■□□□□ 0.35
UBCP0CG48 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.24■□□□□ 0.35
UBCP0CG48 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.24■□□□□ 0.35
UBCP0CG48 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.24■□□□□ 0.35
UBCP0CG48 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBCP0CG48 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBCP0CG48 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.24■□□□□ 0.35
UBCP0CG48 PHGDH-210ENST00000641115 1638 ntBASIC17.24■□□□□ 0.35
UBCP0CG48 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBCP0CG48 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBCP0CG48 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBCP0CG48 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.24■□□□□ 0.35
UBCP0CG48 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
UBCP0CG48 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBCP0CG48 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBCP0CG48 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBCP0CG48 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBCP0CG48 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBCP0CG48 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
UBCP0CG48 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBCP0CG48 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.23■□□□□ 0.35
UBCP0CG48 AP000974.1-201ENST00000623909 2387 ntBASIC17.23■□□□□ 0.35
UBCP0CG48 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBCP0CG48 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBCP0CG48 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.23■□□□□ 0.35
UBCP0CG48 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms