Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINGO3P0C6S8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
LINGO3P0C6S8 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINGO3P0C6S8 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINGO3P0C6S8 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
LINGO3P0C6S8 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LINGO3P0C6S8 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LINGO3P0C6S8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINGO3P0C6S8 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINGO3P0C6S8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
LINGO3P0C6S8 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
LINGO3P0C6S8 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LINGO3P0C6S8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19■□□□□ 0.63
LINGO3P0C6S8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
LINGO3P0C6S8 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LINGO3P0C6S8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LINGO3P0C6S8 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
LINGO3P0C6S8 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19■□□□□ 0.63
LINGO3P0C6S8 AC104581.1-202ENST00000635932 2618 ntBASIC19■□□□□ 0.63
LINGO3P0C6S8 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LINGO3P0C6S8 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19■□□□□ 0.63
LINGO3P0C6S8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
LINGO3P0C6S8 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LINGO3P0C6S8 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19■□□□□ 0.63
LINGO3P0C6S8 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19■□□□□ 0.63
LINGO3P0C6S8 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LINGO3P0C6S8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19■□□□□ 0.63
LINGO3P0C6S8 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19■□□□□ 0.63
LINGO3P0C6S8 AC022517.1-201ENST00000592429 346 ntBASIC19■□□□□ 0.63
LINGO3P0C6S8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19■□□□□ 0.63
LINGO3P0C6S8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19■□□□□ 0.63
LINGO3P0C6S8 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
LINGO3P0C6S8 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
LINGO3P0C6S8 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LINGO3P0C6S8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19■□□□□ 0.63
LINGO3P0C6S8 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19■□□□□ 0.63
LINGO3P0C6S8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LINGO3P0C6S8 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LINGO3P0C6S8 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LINGO3P0C6S8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LINGO3P0C6S8 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19■□□□□ 0.63
LINGO3P0C6S8 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINGO3P0C6S8 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.99■□□□□ 0.63
LINGO3P0C6S8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINGO3P0C6S8 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.99■□□□□ 0.63
LINGO3P0C6S8 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINGO3P0C6S8 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
LINGO3P0C6S8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINGO3P0C6S8 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINGO3P0C6S8 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.99■□□□□ 0.63
LINGO3P0C6S8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINGO3P0C6S8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.99■□□□□ 0.63
LINGO3P0C6S8 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.99■□□□□ 0.63
LINGO3P0C6S8 AC137761.2-201ENST00000561729 223 ntBASIC18.99■□□□□ 0.63
LINGO3P0C6S8 AC145350.3-201ENST00000569033 163 ntBASIC18.99■□□□□ 0.63
LINGO3P0C6S8 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.99■□□□□ 0.63
LINGO3P0C6S8 UBE2DNL-204ENST00000602536 740 ntBASIC18.99■□□□□ 0.63
LINGO3P0C6S8 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.99■□□□□ 0.63
LINGO3P0C6S8 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINGO3P0C6S8 AC121338.2-201ENST00000622535 1744 ntBASIC18.99■□□□□ 0.63
LINGO3P0C6S8 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINGO3P0C6S8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINGO3P0C6S8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LINGO3P0C6S8 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
LINGO3P0C6S8 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINGO3P0C6S8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINGO3P0C6S8 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINGO3P0C6S8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LINGO3P0C6S8 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LINGO3P0C6S8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINGO3P0C6S8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINGO3P0C6S8 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.98■□□□□ 0.63
LINGO3P0C6S8 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.98■□□□□ 0.63
LINGO3P0C6S8 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.98■□□□□ 0.63
LINGO3P0C6S8 AC006015.1-201ENST00000429970 570 ntBASIC18.98■□□□□ 0.63
LINGO3P0C6S8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.98■□□□□ 0.63
LINGO3P0C6S8 SLC7A5P1-201ENST00000568957 537 ntBASIC18.98■□□□□ 0.63
LINGO3P0C6S8 Z82202.1-201ENST00000623446 1880 ntBASIC18.98■□□□□ 0.63
LINGO3P0C6S8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.98■□□□□ 0.63
LINGO3P0C6S8 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINGO3P0C6S8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINGO3P0C6S8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINGO3P0C6S8 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINGO3P0C6S8 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
LINGO3P0C6S8 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINGO3P0C6S8 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LINGO3P0C6S8 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINGO3P0C6S8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINGO3P0C6S8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.97■□□□□ 0.63
LINGO3P0C6S8 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LINGO3P0C6S8 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.97■□□□□ 0.63
LINGO3P0C6S8 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINGO3P0C6S8 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.97■□□□□ 0.63
LINGO3P0C6S8 AC245052.3-201ENST00000450182 901 ntBASIC18.97■□□□□ 0.63
LINGO3P0C6S8 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LINGO3P0C6S8 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.97■□□□□ 0.63
LINGO3P0C6S8 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LINGO3P0C6S8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.97■□□□□ 0.63
LINGO3P0C6S8 AC009113.1-201ENST00000570267 2443 ntBASIC18.97■□□□□ 0.63
LINGO3P0C6S8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms