Protein–RNA interactions for Protein: P08865

RPSA, 40S ribosomal protein SA, humanhuman

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP08865 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPSAP08865 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.97■□□□□ 0.63
RPSAP08865 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPSAP08865 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RPSAP08865 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPSAP08865 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPSAP08865 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RPSAP08865 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.97■□□□□ 0.63
RPSAP08865 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPSAP08865 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RPSAP08865 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RPSAP08865 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPSAP08865 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.97■□□□□ 0.63
RPSAP08865 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RPSAP08865 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.97■□□□□ 0.63
RPSAP08865 AC241377.3-202ENST00000626088 1088 ntBASIC18.97■□□□□ 0.63
RPSAP08865 AC241585.3-202ENST00000628937 1088 ntBASIC18.97■□□□□ 0.63
RPSAP08865 AC245100.8-202ENST00000629247 1058 ntBASIC18.97■□□□□ 0.63
RPSAP08865 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPSAP08865 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RPSAP08865 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RPSAP08865 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPSAP08865 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPSAP08865 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPSAP08865 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
RPSAP08865 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPSAP08865 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPSAP08865 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RPSAP08865 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPSAP08865 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.96■□□□□ 0.63
RPSAP08865 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPSAP08865 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPSAP08865 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPSAP08865 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPSAP08865 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPSAP08865 BICD1-207ENST00000551848 1962 ntBASIC18.96■□□□□ 0.63
RPSAP08865 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPSAP08865 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RPSAP08865 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.96■□□□□ 0.63
RPSAP08865 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPSAP08865 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.96■□□□□ 0.63
RPSAP08865 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.96■□□□□ 0.63
RPSAP08865 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.96■□□□□ 0.63
RPSAP08865 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPSAP08865 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
RPSAP08865 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPSAP08865 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPSAP08865 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPSAP08865 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPSAP08865 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RPSAP08865 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
RPSAP08865 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RPSAP08865 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPSAP08865 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.95■□□□□ 0.62
RPSAP08865 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.95■□□□□ 0.62
RPSAP08865 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPSAP08865 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.95■□□□□ 0.62
RPSAP08865 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.95■□□□□ 0.62
RPSAP08865 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPSAP08865 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPSAP08865 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.95■□□□□ 0.62
RPSAP08865 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPSAP08865 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.95■□□□□ 0.62
RPSAP08865 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPSAP08865 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPSAP08865 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RPSAP08865 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPSAP08865 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
RPSAP08865 AL031602.1-201ENST00000633169 911 ntBASIC18.95■□□□□ 0.62
RPSAP08865 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.95■□□□□ 0.62
RPSAP08865 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPSAP08865 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPSAP08865 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RPSAP08865 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPSAP08865 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPSAP08865 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPSAP08865 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RPSAP08865 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPSAP08865 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.95■□□□□ 0.62
RPSAP08865 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.95■□□□□ 0.62
RPSAP08865 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RPSAP08865 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPSAP08865 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RPSAP08865 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPSAP08865 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.94■□□□□ 0.62
RPSAP08865 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPSAP08865 PKD1P1-201ENST00000458669 6805 ntBASIC18.94■□□□□ 0.62
RPSAP08865 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPSAP08865 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPSAP08865 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPSAP08865 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPSAP08865 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPSAP08865 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPSAP08865 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.94■□□□□ 0.62
RPSAP08865 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
RPSAP08865 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RPSAP08865 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPSAP08865 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPSAP08865 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPSAP08865 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms