Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
MMP3P08254 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MMP3P08254 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MMP3P08254 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
MMP3P08254 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MMP3P08254 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
MMP3P08254 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.9■■□□□ 1.1
MMP3P08254 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MMP3P08254 CRYGFP-201ENST00000418459 633 ntBASIC21.9■■□□□ 1.1
MMP3P08254 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.9■■□□□ 1.1
MMP3P08254 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
MMP3P08254 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.9■■□□□ 1.1
MMP3P08254 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.9■■□□□ 1.1
MMP3P08254 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.9■■□□□ 1.1
MMP3P08254 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
MMP3P08254 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MMP3P08254 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.9■■□□□ 1.1
MMP3P08254 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MMP3P08254 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
MMP3P08254 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.9■■□□□ 1.1
MMP3P08254 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
MMP3P08254 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
MMP3P08254 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MMP3P08254 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
MMP3P08254 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
MMP3P08254 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
MMP3P08254 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
MMP3P08254 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MMP3P08254 TSPY14P-201ENST00000303979 915 ntBASIC21.89■■□□□ 1.09
MMP3P08254 ARMC10P1-201ENST00000313754 855 ntBASIC21.89■■□□□ 1.09
MMP3P08254 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.89■■□□□ 1.09
MMP3P08254 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MMP3P08254 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.89■■□□□ 1.09
MMP3P08254 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.89■■□□□ 1.09
MMP3P08254 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.89■■□□□ 1.09
MMP3P08254 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
MMP3P08254 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
MMP3P08254 AC010203.1-204ENST00000548782 407 ntBASIC21.89■■□□□ 1.09
MMP3P08254 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.89■■□□□ 1.09
MMP3P08254 AC130371.2-201ENST00000619443 611 ntBASIC21.89■■□□□ 1.09
MMP3P08254 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
MMP3P08254 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
MMP3P08254 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MMP3P08254 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.89■■□□□ 1.09
MMP3P08254 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
MMP3P08254 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.89■■□□□ 1.09
MMP3P08254 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
MMP3P08254 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.88■■□□□ 1.09
MMP3P08254 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
MMP3P08254 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MMP3P08254 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MMP3P08254 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MMP3P08254 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
MMP3P08254 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
MMP3P08254 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MMP3P08254 AC008040.2-201ENST00000461049 708 ntBASIC21.88■■□□□ 1.09
MMP3P08254 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.88■■□□□ 1.09
MMP3P08254 EGLN1P1-201ENST00000531623 762 ntBASIC21.88■■□□□ 1.09
MMP3P08254 AP000692.2-201ENST00000608391 879 ntBASIC21.88■■□□□ 1.09
MMP3P08254 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.88■■□□□ 1.09
MMP3P08254 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
MMP3P08254 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MMP3P08254 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.88■■□□□ 1.09
MMP3P08254 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
MMP3P08254 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.87■■□□□ 1.09
MMP3P08254 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
MMP3P08254 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MMP3P08254 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.87■■□□□ 1.09
MMP3P08254 ECEL1P2-202ENST00000465689 757 ntBASIC21.87■■□□□ 1.09
MMP3P08254 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
MMP3P08254 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.87■■□□□ 1.09
MMP3P08254 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.87■■□□□ 1.09
MMP3P08254 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.87■■□□□ 1.09
MMP3P08254 AC011298.2-201ENST00000617989 482 ntBASIC21.87■■□□□ 1.09
MMP3P08254 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
MMP3P08254 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
MMP3P08254 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MMP3P08254 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
MMP3P08254 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MMP3P08254 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MMP3P08254 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.86■■□□□ 1.09
MMP3P08254 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
MMP3P08254 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.86■■□□□ 1.09
MMP3P08254 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
MMP3P08254 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
MMP3P08254 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
MMP3P08254 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.86■■□□□ 1.09
MMP3P08254 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.86■■□□□ 1.09
MMP3P08254 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.86■■□□□ 1.09
MMP3P08254 SLC25A1P4-201ENST00000567977 778 ntBASIC21.86■■□□□ 1.09
MMP3P08254 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.86■■□□□ 1.09
MMP3P08254 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
MMP3P08254 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MMP3P08254 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.86■■□□□ 1.09
MMP3P08254 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MMP3P08254 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.85■■□□□ 1.09
MMP3P08254 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
MMP3P08254 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
MMP3P08254 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
MMP3P08254 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms