Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC26.14■■□□□ 1.78
COL5A2P05997 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
COL5A2P05997 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC26.14■■□□□ 1.78
COL5A2P05997 AL671277.2-201ENST00000458060 996 ntBASIC26.14■■□□□ 1.78
COL5A2P05997 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC26.14■■□□□ 1.78
COL5A2P05997 AC093458.2-201ENST00000623150 629 ntBASIC26.14■■□□□ 1.78
COL5A2P05997 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC26.14■■□□□ 1.77
COL5A2P05997 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC26.14■■□□□ 1.77
COL5A2P05997 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
COL5A2P05997 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL5A2P05997 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
COL5A2P05997 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC26.13■■□□□ 1.77
COL5A2P05997 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL5A2P05997 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC26.13■■□□□ 1.77
COL5A2P05997 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC26.13■■□□□ 1.77
COL5A2P05997 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC26.13■■□□□ 1.77
COL5A2P05997 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC26.13■■□□□ 1.77
COL5A2P05997 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
COL5A2P05997 AL441883.1-201ENST00000566170 1045 ntBASIC26.13■■□□□ 1.77
COL5A2P05997 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC26.13■■□□□ 1.77
COL5A2P05997 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC26.13■■□□□ 1.77
COL5A2P05997 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC26.13■■□□□ 1.77
COL5A2P05997 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
COL5A2P05997 ERF-202ENST00000440177 2032 ntTSL 2 BASIC26.13■■□□□ 1.77
COL5A2P05997 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
COL5A2P05997 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL5A2P05997 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
COL5A2P05997 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
COL5A2P05997 AL450487.1-201ENST00000426799 995 ntBASIC26.12■■□□□ 1.77
COL5A2P05997 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
COL5A2P05997 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC26.12■■□□□ 1.77
COL5A2P05997 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL5A2P05997 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL5A2P05997 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL5A2P05997 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
COL5A2P05997 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC26.12■■□□□ 1.77
COL5A2P05997 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC26.12■■□□□ 1.77
COL5A2P05997 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC26.12■■□□□ 1.77
COL5A2P05997 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL5A2P05997 IPPK-202ENST00000375522 882 ntTSL 3 BASIC26.11■■□□□ 1.77
COL5A2P05997 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC26.11■■□□□ 1.77
COL5A2P05997 HOMER2P1-201ENST00000455653 964 ntBASIC26.11■■□□□ 1.77
COL5A2P05997 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC26.11■■□□□ 1.77
COL5A2P05997 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC26.11■■□□□ 1.77
COL5A2P05997 AL023973.1-201ENST00000624619 620 ntBASIC26.11■■□□□ 1.77
COL5A2P05997 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
COL5A2P05997 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL5A2P05997 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL5A2P05997 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL5A2P05997 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
COL5A2P05997 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL5A2P05997 HCG4P8-203ENST00000443049 980 ntBASIC26.11■■□□□ 1.77
COL5A2P05997 KRT18P38-201ENST00000449496 1282 ntBASIC26.11■■□□□ 1.77
COL5A2P05997 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC26.11■■□□□ 1.77
COL5A2P05997 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC26.11■■□□□ 1.77
COL5A2P05997 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
COL5A2P05997 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
COL5A2P05997 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC26.1■■□□□ 1.77
COL5A2P05997 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL5A2P05997 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
COL5A2P05997 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
COL5A2P05997 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL5A2P05997 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC26.1■■□□□ 1.77
COL5A2P05997 TSPY17P-201ENST00000450329 467 ntBASIC26.1■■□□□ 1.77
COL5A2P05997 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC26.1■■□□□ 1.77
COL5A2P05997 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC26.1■■□□□ 1.77
COL5A2P05997 CD81-212ENST00000526072 1172 ntTSL 5 BASIC26.1■■□□□ 1.77
COL5A2P05997 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC26.1■■□□□ 1.77
COL5A2P05997 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC26.1■■□□□ 1.77
COL5A2P05997 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL5A2P05997 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC26.1■■□□□ 1.77
COL5A2P05997 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
COL5A2P05997 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
COL5A2P05997 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
COL5A2P05997 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
COL5A2P05997 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC26.09■■□□□ 1.77
COL5A2P05997 AL353719.1-201ENST00000566847 864 ntBASIC26.09■■□□□ 1.77
COL5A2P05997 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC26.09■■□□□ 1.77
COL5A2P05997 AC083849.1-201ENST00000615227 514 ntBASIC26.09■■□□□ 1.77
COL5A2P05997 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
COL5A2P05997 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
COL5A2P05997 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
COL5A2P05997 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
COL5A2P05997 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
COL5A2P05997 FBXW4P1-201ENST00000426721 2239 ntBASIC26.08■■□□□ 1.77
COL5A2P05997 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC26.08■■□□□ 1.77
COL5A2P05997 CLEC4GP1-201ENST00000596555 870 ntBASIC26.08■■□□□ 1.77
COL5A2P05997 AC069148.1-201ENST00000608741 768 ntBASIC26.08■■□□□ 1.77
COL5A2P05997 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
COL5A2P05997 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
COL5A2P05997 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC26.07■■□□□ 1.76
COL5A2P05997 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC26.07■■□□□ 1.76
COL5A2P05997 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC26.07■■□□□ 1.76
COL5A2P05997 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
COL5A2P05997 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
COL5A2P05997 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
COL5A2P05997 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
COL5A2P05997 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
COL5A2P05997 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
COL5A2P05997 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms