Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 COPE-203ENST00000351079 907 ntTSL 2 BASIC22.01■■□□□ 1.11
PGK1P00558 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PGK1P00558 HMGA1P5-201ENST00000412453 271 ntBASIC22.01■■□□□ 1.11
PGK1P00558 ISCU-203ENST00000431221 799 ntTSL 2 BASIC22.01■■□□□ 1.11
PGK1P00558 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
PGK1P00558 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC22.01■■□□□ 1.11
PGK1P00558 LINC01238-205ENST00000567549 1107 ntBASIC22.01■■□□□ 1.11
PGK1P00558 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC22.01■■□□□ 1.11
PGK1P00558 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PGK1P00558 AC091076.1-201ENST00000610741 619 ntBASIC22.01■■□□□ 1.11
PGK1P00558 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PGK1P00558 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
PGK1P00558 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PGK1P00558 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PGK1P00558 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
PGK1P00558 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PGK1P00558 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC22.01■■□□□ 1.11
PGK1P00558 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.01■■□□□ 1.11
PGK1P00558 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
PGK1P00558 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
PGK1P00558 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PGK1P00558 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
PGK1P00558 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC22■■□□□ 1.11
PGK1P00558 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC22■■□□□ 1.11
PGK1P00558 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
PGK1P00558 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC22■■□□□ 1.11
PGK1P00558 AC091390.4-202ENST00000476426 537 ntBASIC22■■□□□ 1.11
PGK1P00558 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PGK1P00558 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PGK1P00558 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22■■□□□ 1.11
PGK1P00558 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC22■■□□□ 1.11
PGK1P00558 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PGK1P00558 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC22■■□□□ 1.11
PGK1P00558 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PGK1P00558 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.99■■□□□ 1.11
PGK1P00558 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
PGK1P00558 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PGK1P00558 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
PGK1P00558 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.99■■□□□ 1.11
PGK1P00558 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PGK1P00558 MFAP1P1-201ENST00000442257 1255 ntBASIC21.99■■□□□ 1.11
PGK1P00558 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PGK1P00558 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.99■■□□□ 1.11
PGK1P00558 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
PGK1P00558 AL138966.2-201ENST00000621997 464 ntBASIC21.99■■□□□ 1.11
PGK1P00558 HLA-A-209ENST00000638375 975 ntBASIC21.99■■□□□ 1.11
PGK1P00558 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.99■■□□□ 1.11
PGK1P00558 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PGK1P00558 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PGK1P00558 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
PGK1P00558 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PGK1P00558 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
PGK1P00558 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PGK1P00558 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
PGK1P00558 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
PGK1P00558 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PGK1P00558 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PGK1P00558 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PGK1P00558 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.98■■□□□ 1.11
PGK1P00558 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PGK1P00558 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.98■■□□□ 1.11
PGK1P00558 AC004951.3-201ENST00000418645 1148 ntBASIC21.98■■□□□ 1.11
PGK1P00558 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.98■■□□□ 1.11
PGK1P00558 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
PGK1P00558 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PGK1P00558 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
PGK1P00558 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.98■■□□□ 1.11
PGK1P00558 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.98■■□□□ 1.11
PGK1P00558 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.98■■□□□ 1.11
PGK1P00558 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.98■■□□□ 1.11
PGK1P00558 MYC-208ENST00000641036 567 ntBASIC21.98■■□□□ 1.11
PGK1P00558 AC116562.4-202ENST00000641738 218 ntBASIC21.98■■□□□ 1.11
PGK1P00558 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PGK1P00558 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
PGK1P00558 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PGK1P00558 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PGK1P00558 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PGK1P00558 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PGK1P00558 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
PGK1P00558 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PGK1P00558 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PGK1P00558 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.97■■□□□ 1.11
PGK1P00558 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.97■■□□□ 1.11
PGK1P00558 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PGK1P00558 RNF152P1-201ENST00000397754 604 ntBASIC21.97■■□□□ 1.11
PGK1P00558 AL031133.1-201ENST00000406807 723 ntBASIC21.97■■□□□ 1.11
PGK1P00558 FAM8A6P-201ENST00000407496 1135 ntBASIC21.97■■□□□ 1.11
PGK1P00558 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
PGK1P00558 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PGK1P00558 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.97■■□□□ 1.11
PGK1P00558 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PGK1P00558 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.97■■□□□ 1.11
PGK1P00558 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.97■■□□□ 1.11
PGK1P00558 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.97■■□□□ 1.11
PGK1P00558 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PGK1P00558 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.97■■□□□ 1.11
PGK1P00558 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.97■■□□□ 1.11
PGK1P00558 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
PGK1P00558 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PGK1P00558 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms