Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE6O95741 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE6O95741 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE6O95741 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE6O95741 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE6O95741 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE6O95741 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE6O95741 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE6O95741 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE6O95741 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE6O95741 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
CPNE6O95741 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE6O95741 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CPNE6O95741 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CPNE6O95741 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE6O95741 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.35■□□□□ 0.69
CPNE6O95741 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.35■□□□□ 0.69
CPNE6O95741 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE6O95741 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.35■□□□□ 0.69
CPNE6O95741 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.35■□□□□ 0.69
CPNE6O95741 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CPNE6O95741 REXO1L12P-201ENST00000622156 912 ntBASIC19.35■□□□□ 0.69
CPNE6O95741 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE6O95741 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.35■□□□□ 0.69
CPNE6O95741 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE6O95741 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE6O95741 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.35■□□□□ 0.69
CPNE6O95741 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE6O95741 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE6O95741 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CPNE6O95741 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE6O95741 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE6O95741 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
CPNE6O95741 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE6O95741 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.34■□□□□ 0.69
CPNE6O95741 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CPNE6O95741 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.34■□□□□ 0.69
CPNE6O95741 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE6O95741 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE6O95741 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE6O95741 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE6O95741 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.34■□□□□ 0.69
CPNE6O95741 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.34■□□□□ 0.69
CPNE6O95741 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.34■□□□□ 0.69
CPNE6O95741 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE6O95741 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.34■□□□□ 0.69
CPNE6O95741 MIR4785-201ENST00000585005 73 ntBASIC19.34■□□□□ 0.69
CPNE6O95741 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.34■□□□□ 0.69
CPNE6O95741 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE6O95741 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE6O95741 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE6O95741 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE6O95741 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE6O95741 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE6O95741 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE6O95741 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE6O95741 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.34■□□□□ 0.69
CPNE6O95741 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CPNE6O95741 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.33■□□□□ 0.69
CPNE6O95741 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
CPNE6O95741 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CPNE6O95741 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.33■□□□□ 0.69
CPNE6O95741 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CPNE6O95741 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.69
CPNE6O95741 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CPNE6O95741 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CPNE6O95741 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CPNE6O95741 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.33■□□□□ 0.68
CPNE6O95741 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.33■□□□□ 0.68
CPNE6O95741 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CPNE6O95741 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPNE6O95741 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.33■□□□□ 0.68
CPNE6O95741 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.33■□□□□ 0.68
CPNE6O95741 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPNE6O95741 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.33■□□□□ 0.68
CPNE6O95741 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.33■□□□□ 0.68
CPNE6O95741 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
CPNE6O95741 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPNE6O95741 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPNE6O95741 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.33■□□□□ 0.68
CPNE6O95741 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPNE6O95741 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.33■□□□□ 0.68
CPNE6O95741 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPNE6O95741 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CPNE6O95741 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CPNE6O95741 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.33■□□□□ 0.68
CPNE6O95741 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.32■□□□□ 0.68
CPNE6O95741 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
CPNE6O95741 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.32■□□□□ 0.68
CPNE6O95741 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPNE6O95741 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
CPNE6O95741 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPNE6O95741 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CPNE6O95741 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPNE6O95741 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPNE6O95741 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CPNE6O95741 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CPNE6O95741 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CPNE6O95741 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CPNE6O95741 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms