Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 LSM12P1-201ENST00000411836 588 ntBASIC19.93■□□□□ 0.78
USP1O94782 AC026185.1-201ENST00000445748 174 ntBASIC19.93■□□□□ 0.78
USP1O94782 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
USP1O94782 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.93■□□□□ 0.78
USP1O94782 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP1O94782 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP1O94782 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP1O94782 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.93■□□□□ 0.78
USP1O94782 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.93■□□□□ 0.78
USP1O94782 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.93■□□□□ 0.78
USP1O94782 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
USP1O94782 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
USP1O94782 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP1O94782 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP1O94782 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP1O94782 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP1O94782 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP1O94782 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.93■□□□□ 0.78
USP1O94782 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP1O94782 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
USP1O94782 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP1O94782 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP1O94782 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP1O94782 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP1O94782 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP1O94782 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP1O94782 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP1O94782 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP1O94782 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP1O94782 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP1O94782 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.92■□□□□ 0.78
USP1O94782 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.92■□□□□ 0.78
USP1O94782 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.92■□□□□ 0.78
USP1O94782 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.92■□□□□ 0.78
USP1O94782 RAP2CP1-201ENST00000605103 478 ntBASIC19.92■□□□□ 0.78
USP1O94782 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP1O94782 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP1O94782 AC018445.3-201ENST00000624177 1945 ntBASIC19.92■□□□□ 0.78
USP1O94782 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.92■□□□□ 0.78
USP1O94782 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP1O94782 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP1O94782 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.92■□□□□ 0.78
USP1O94782 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
USP1O94782 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP1O94782 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP1O94782 AC093484.2-201ENST00000580996 2166 ntBASIC19.91■□□□□ 0.78
USP1O94782 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.91■□□□□ 0.78
USP1O94782 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP1O94782 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP1O94782 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.91■□□□□ 0.78
USP1O94782 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.91■□□□□ 0.78
USP1O94782 MIR663A-201ENST00000385250 93 ntBASIC19.91■□□□□ 0.78
USP1O94782 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
USP1O94782 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.91■□□□□ 0.78
USP1O94782 AL050303.2-201ENST00000619798 666 ntBASIC19.91■□□□□ 0.78
USP1O94782 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP1O94782 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP1O94782 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
USP1O94782 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
USP1O94782 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP1O94782 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP1O94782 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP1O94782 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP1O94782 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.91■□□□□ 0.78
USP1O94782 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP1O94782 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP1O94782 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP1O94782 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP1O94782 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.9■□□□□ 0.78
USP1O94782 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
USP1O94782 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP1O94782 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
USP1O94782 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
USP1O94782 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
USP1O94782 AC005332.7-201ENST00000614046 2005 ntBASIC19.9■□□□□ 0.78
USP1O94782 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
USP1O94782 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.9■□□□□ 0.78
USP1O94782 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.9■□□□□ 0.78
USP1O94782 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.9■□□□□ 0.78
USP1O94782 AF201337.1-201ENST00000520239 748 ntBASIC19.9■□□□□ 0.78
USP1O94782 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.9■□□□□ 0.78
USP1O94782 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP1O94782 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP1O94782 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
USP1O94782 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP1O94782 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP1O94782 MKRN4P-201ENST00000444706 1521 ntBASIC19.9■□□□□ 0.78
USP1O94782 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP1O94782 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.9■□□□□ 0.78
USP1O94782 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP1O94782 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.9■□□□□ 0.78
USP1O94782 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP1O94782 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP1O94782 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.89■□□□□ 0.78
USP1O94782 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
USP1O94782 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
USP1O94782 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP1O94782 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP1O94782 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP1O94782 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms