Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PHGDHO43175 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PHGDHO43175 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.6■□□□□ 0.73
PHGDHO43175 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PHGDHO43175 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PHGDHO43175 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.6■□□□□ 0.73
PHGDHO43175 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.6■□□□□ 0.73
PHGDHO43175 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.6■□□□□ 0.73
PHGDHO43175 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHGDHO43175 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHGDHO43175 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.59■□□□□ 0.73
PHGDHO43175 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PHGDHO43175 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHGDHO43175 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHGDHO43175 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHGDHO43175 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHGDHO43175 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.59■□□□□ 0.73
PHGDHO43175 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHGDHO43175 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHGDHO43175 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.59■□□□□ 0.73
PHGDHO43175 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHGDHO43175 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.59■□□□□ 0.73
PHGDHO43175 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.59■□□□□ 0.73
PHGDHO43175 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHGDHO43175 AC073111.5-205ENST00000641717 521 ntBASIC19.59■□□□□ 0.73
PHGDHO43175 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
PHGDHO43175 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHGDHO43175 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHGDHO43175 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
PHGDHO43175 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHGDHO43175 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.59■□□□□ 0.73
PHGDHO43175 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHGDHO43175 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PHGDHO43175 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.59■□□□□ 0.73
PHGDHO43175 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHGDHO43175 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PHGDHO43175 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PHGDHO43175 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.59■□□□□ 0.73
PHGDHO43175 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PHGDHO43175 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PHGDHO43175 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PHGDHO43175 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.59■□□□□ 0.73
PHGDHO43175 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
PHGDHO43175 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PHGDHO43175 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PHGDHO43175 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PHGDHO43175 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PHGDHO43175 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.58■□□□□ 0.72
PHGDHO43175 LSM12P1-201ENST00000411836 588 ntBASIC19.58■□□□□ 0.72
PHGDHO43175 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.58■□□□□ 0.72
PHGDHO43175 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.58■□□□□ 0.72
PHGDHO43175 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.58■□□□□ 0.72
PHGDHO43175 AL050303.2-201ENST00000619798 666 ntBASIC19.58■□□□□ 0.72
PHGDHO43175 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PHGDHO43175 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PHGDHO43175 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PHGDHO43175 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PHGDHO43175 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PHGDHO43175 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
PHGDHO43175 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PHGDHO43175 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PHGDHO43175 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
PHGDHO43175 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
PHGDHO43175 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PHGDHO43175 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PHGDHO43175 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PHGDHO43175 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
PHGDHO43175 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.57■□□□□ 0.72
PHGDHO43175 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PHGDHO43175 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PHGDHO43175 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PHGDHO43175 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.57■□□□□ 0.72
PHGDHO43175 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PHGDHO43175 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PHGDHO43175 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PHGDHO43175 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PHGDHO43175 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.57■□□□□ 0.72
PHGDHO43175 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.57■□□□□ 0.72
PHGDHO43175 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.57■□□□□ 0.72
PHGDHO43175 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.57■□□□□ 0.72
PHGDHO43175 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.57■□□□□ 0.72
PHGDHO43175 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PHGDHO43175 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PHGDHO43175 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PHGDHO43175 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.57■□□□□ 0.72
PHGDHO43175 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PHGDHO43175 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PHGDHO43175 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PHGDHO43175 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PHGDHO43175 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PHGDHO43175 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PHGDHO43175 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PHGDHO43175 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.56■□□□□ 0.72
PHGDHO43175 AC120498.9-201ENST00000339021 3867 ntBASIC19.56■□□□□ 0.72
PHGDHO43175 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHGDHO43175 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.56■□□□□ 0.72
PHGDHO43175 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.56■□□□□ 0.72
PHGDHO43175 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHGDHO43175 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHGDHO43175 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms