Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC073130.3-201ENST00000624389 2278 ntBASIC18.18■□□□□ 0.5
TO15178 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TO15178 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TO15178 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.18■□□□□ 0.5
TO15178 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.18■□□□□ 0.5
TO15178 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TO15178 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.18■□□□□ 0.5
TO15178 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.18■□□□□ 0.5
TO15178 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TO15178 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
TO15178 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TO15178 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TO15178 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.18■□□□□ 0.5
TO15178 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TO15178 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.18■□□□□ 0.5
TO15178 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TO15178 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TO15178 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TO15178 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TO15178 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TO15178 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.17■□□□□ 0.5
TO15178 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TO15178 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TO15178 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TO15178 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TO15178 KRT18P29-201ENST00000397031 1267 ntBASIC18.17■□□□□ 0.5
TO15178 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.17■□□□□ 0.5
TO15178 AC133681.1-201ENST00000465482 601 ntBASIC18.17■□□□□ 0.5
TO15178 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TO15178 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TO15178 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TO15178 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
TO15178 AP006587.1-201ENST00000534129 1502 ntBASIC18.17■□□□□ 0.5
TO15178 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
TO15178 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TO15178 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TO15178 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TO15178 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TO15178 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
TO15178 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TO15178 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TO15178 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TO15178 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TO15178 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.16■□□□□ 0.5
TO15178 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TO15178 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TO15178 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TO15178 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TO15178 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.16■□□□□ 0.5
TO15178 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TO15178 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TO15178 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.16■□□□□ 0.5
TO15178 YBX1P10-201ENST00000444752 975 ntBASIC18.16■□□□□ 0.5
TO15178 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.16■□□□□ 0.5
TO15178 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.16■□□□□ 0.5
TO15178 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.16■□□□□ 0.5
TO15178 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.16■□□□□ 0.5
TO15178 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TO15178 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.16■□□□□ 0.5
TO15178 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.16■□□□□ 0.5
TO15178 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.16■□□□□ 0.5
TO15178 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.16■□□□□ 0.5
TO15178 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TO15178 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
TO15178 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TO15178 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.15■□□□□ 0.5
TO15178 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TO15178 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TO15178 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.15■□□□□ 0.5
TO15178 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TO15178 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TO15178 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TO15178 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.15■□□□□ 0.5
TO15178 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
TO15178 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.15■□□□□ 0.5
TO15178 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TO15178 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TO15178 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TO15178 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TO15178 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TO15178 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.15■□□□□ 0.5
TO15178 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TO15178 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TO15178 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TO15178 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.15■□□□□ 0.5
TO15178 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.15■□□□□ 0.5
TO15178 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.15■□□□□ 0.5
TO15178 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.15■□□□□ 0.5
TO15178 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.15■□□□□ 0.5
TO15178 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
TO15178 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TO15178 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TO15178 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TO15178 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.15■□□□□ 0.5
TO15178 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.15■□□□□ 0.5
TO15178 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TO15178 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.14■□□□□ 0.5
TO15178 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.14■□□□□ 0.49
TO15178 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TO15178 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms