Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC27.62■■■□□ 2.01
CHD2O14647 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
CHD2O14647 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
CHD2O14647 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
CHD2O14647 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC27.62■■■□□ 2.01
CHD2O14647 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CHD2O14647 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CHD2O14647 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CHD2O14647 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC27.61■■■□□ 2.01
CHD2O14647 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CHD2O14647 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC27.61■■■□□ 2.01
CHD2O14647 FXN-203ENST00000396366 922 ntTSL 2 BASIC27.61■■■□□ 2.01
CHD2O14647 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC27.61■■■□□ 2.01
CHD2O14647 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
CHD2O14647 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CHD2O14647 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CHD2O14647 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC27.61■■■□□ 2.01
CHD2O14647 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
CHD2O14647 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
CHD2O14647 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC27.6■■■□□ 2.01
CHD2O14647 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC27.6■■■□□ 2.01
CHD2O14647 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
CHD2O14647 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
CHD2O14647 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
CHD2O14647 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC27.6■■■□□ 2.01
CHD2O14647 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
CHD2O14647 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC27.6■■■□□ 2.01
CHD2O14647 GALC-202ENST00000393568 2054 ntTSL 2 BASIC27.6■■■□□ 2.01
CHD2O14647 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
CHD2O14647 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
CHD2O14647 SPDYE13P-201ENST00000445314 798 ntBASIC27.6■■■□□ 2.01
CHD2O14647 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
CHD2O14647 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC27.6■■■□□ 2.01
CHD2O14647 LY6E-213ENST00000522528 606 ntTSL 3 BASIC27.6■■■□□ 2.01
CHD2O14647 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC27.6■■■□□ 2.01
CHD2O14647 AL136038.3-201ENST00000561909 1096 ntBASIC27.6■■■□□ 2.01
CHD2O14647 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC27.6■■■□□ 2.01
CHD2O14647 HYMAI.1-201ENST00000620949 238 ntBASIC27.6■■■□□ 2.01
CHD2O14647 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
CHD2O14647 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
CHD2O14647 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC27.59■■■□□ 2.01
CHD2O14647 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC27.59■■■□□ 2.01
CHD2O14647 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
CHD2O14647 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
CHD2O14647 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
CHD2O14647 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC27.59■■■□□ 2.01
CHD2O14647 PRSS44-201ENST00000515154 1146 ntBASIC27.59■■■□□ 2.01
CHD2O14647 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
CHD2O14647 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC27.59■■■□□ 2.01
CHD2O14647 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC27.59■■■□□ 2.01
CHD2O14647 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
CHD2O14647 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC27.58■■■□□ 2.01
CHD2O14647 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
CHD2O14647 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC27.58■■■□□ 2.01
CHD2O14647 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
CHD2O14647 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC27.58■■■□□ 2.01
CHD2O14647 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
CHD2O14647 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC27.58■■■□□ 2.01
CHD2O14647 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC27.58■■■□□ 2.01
CHD2O14647 IRF5-214ENST00000613821 595 ntTSL 5 BASIC27.58■■■□□ 2.01
CHD2O14647 DFFB-212ENST00000625756 649 ntTSL 5 BASIC27.58■■■□□ 2.01
CHD2O14647 AL049796.1-201ENST00000565336 1766 ntBASIC27.58■■■□□ 2.01
CHD2O14647 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
CHD2O14647 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC27.58■■■□□ 2.01
CHD2O14647 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC27.58■■■□□ 2.01
CHD2O14647 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
CHD2O14647 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC27.57■■■□□ 2
CHD2O14647 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC27.57■■■□□ 2
CHD2O14647 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC27.57■■■□□ 2
CHD2O14647 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC27.57■■■□□ 2
CHD2O14647 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CHD2O14647 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC27.57■■■□□ 2
CHD2O14647 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC27.57■■■□□ 2
CHD2O14647 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
CHD2O14647 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
CHD2O14647 CASK-201ENST00000378154 2494 ntTSL 5 BASIC27.57■■■□□ 2
CHD2O14647 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
CHD2O14647 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CHD2O14647 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC27.57■■■□□ 2
CHD2O14647 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC27.57■■■□□ 2
CHD2O14647 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC27.57■■■□□ 2
CHD2O14647 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CHD2O14647 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC27.57■■■□□ 2
CHD2O14647 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC27.57■■■□□ 2
CHD2O14647 AL024507.2-201ENST00000606070 2574 ntBASIC27.57■■■□□ 2
CHD2O14647 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CHD2O14647 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC27.57■■■□□ 2
CHD2O14647 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC27.57■■■□□ 2
CHD2O14647 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC27.56■■■□□ 2
CHD2O14647 AC121338.2-201ENST00000622535 1744 ntBASIC27.56■■■□□ 2
CHD2O14647 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC27.56■■■□□ 2
CHD2O14647 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC27.56■■■□□ 2
CHD2O14647 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC27.56■■■□□ 2
CHD2O14647 PVRIG2P-201ENST00000435460 978 ntBASIC27.56■■■□□ 2
CHD2O14647 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC27.56■■■□□ 2
CHD2O14647 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC27.56■■■□□ 2
CHD2O14647 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC27.56■■■□□ 2
CHD2O14647 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
CHD2O14647 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CHD2O14647 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC27.56■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms