Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AC008622.2-201ENST00000617006 1229 ntBASIC19.1■□□□□ 0.65
CDX4O14627 AL691432.3-201ENST00000621860 400 ntBASIC19.1■□□□□ 0.65
CDX4O14627 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CDX4O14627 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.1■□□□□ 0.65
CDX4O14627 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.1■□□□□ 0.65
CDX4O14627 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CDX4O14627 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDX4O14627 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.1■□□□□ 0.65
CDX4O14627 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.1■□□□□ 0.65
CDX4O14627 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDX4O14627 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDX4O14627 AC244015.2-201ENST00000616358 1861 ntBASIC19.09■□□□□ 0.65
CDX4O14627 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDX4O14627 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDX4O14627 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDX4O14627 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDX4O14627 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDX4O14627 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDX4O14627 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.09■□□□□ 0.65
CDX4O14627 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.09■□□□□ 0.65
CDX4O14627 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.09■□□□□ 0.65
CDX4O14627 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.09■□□□□ 0.65
CDX4O14627 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDX4O14627 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.09■□□□□ 0.65
CDX4O14627 AL136038.3-201ENST00000561909 1096 ntBASIC19.09■□□□□ 0.65
CDX4O14627 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.09■□□□□ 0.65
CDX4O14627 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.09■□□□□ 0.65
CDX4O14627 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.09■□□□□ 0.65
CDX4O14627 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
CDX4O14627 AC012313.10-201ENST00000623509 926 ntBASIC19.09■□□□□ 0.65
CDX4O14627 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.09■□□□□ 0.65
CDX4O14627 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDX4O14627 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDX4O14627 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDX4O14627 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CDX4O14627 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CDX4O14627 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDX4O14627 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.08■□□□□ 0.65
CDX4O14627 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDX4O14627 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDX4O14627 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.08■□□□□ 0.64
CDX4O14627 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDX4O14627 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDX4O14627 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.08■□□□□ 0.64
CDX4O14627 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.08■□□□□ 0.64
CDX4O14627 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.08■□□□□ 0.64
CDX4O14627 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
CDX4O14627 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
CDX4O14627 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDX4O14627 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDX4O14627 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDX4O14627 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDX4O14627 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDX4O14627 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDX4O14627 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CDX4O14627 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CDX4O14627 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDX4O14627 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDX4O14627 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDX4O14627 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.07■□□□□ 0.64
CDX4O14627 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDX4O14627 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDX4O14627 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDX4O14627 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDX4O14627 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDX4O14627 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.07■□□□□ 0.64
CDX4O14627 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.07■□□□□ 0.64
CDX4O14627 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDX4O14627 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDX4O14627 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CDX4O14627 AC005229.4-201ENST00000610085 2198 ntBASIC19.07■□□□□ 0.64
CDX4O14627 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.07■□□□□ 0.64
CDX4O14627 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CDX4O14627 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CDX4O14627 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CDX4O14627 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.06■□□□□ 0.64
CDX4O14627 AL049796.1-201ENST00000565336 1766 ntBASIC19.06■□□□□ 0.64
CDX4O14627 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CDX4O14627 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.06■□□□□ 0.64
CDX4O14627 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CDX4O14627 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
CDX4O14627 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDX4O14627 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.06■□□□□ 0.64
CDX4O14627 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDX4O14627 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDX4O14627 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDX4O14627 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CDX4O14627 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDX4O14627 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CDX4O14627 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDX4O14627 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CDX4O14627 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDX4O14627 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDX4O14627 Z85996.1-201ENST00000494644 937 ntBASIC19.06■□□□□ 0.64
CDX4O14627 VENTXP5-201ENST00000523979 775 ntBASIC19.06■□□□□ 0.64
CDX4O14627 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDX4O14627 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.06■□□□□ 0.64
CDX4O14627 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.06■□□□□ 0.64
CDX4O14627 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDX4O14627 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms