Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM38O00635 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM38O00635 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
TRIM38O00635 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM38O00635 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM38O00635 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM38O00635 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.83■□□□□ 0.77
TRIM38O00635 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM38O00635 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
TRIM38O00635 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM38O00635 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM38O00635 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
TRIM38O00635 AC239809.2-201ENST00000415381 517 ntBASIC19.83■□□□□ 0.77
TRIM38O00635 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM38O00635 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM38O00635 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM38O00635 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.83■□□□□ 0.77
TRIM38O00635 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.83■□□□□ 0.77
TRIM38O00635 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM38O00635 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM38O00635 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
TRIM38O00635 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM38O00635 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.83■□□□□ 0.76
TRIM38O00635 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.83■□□□□ 0.76
TRIM38O00635 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.83■□□□□ 0.76
TRIM38O00635 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM38O00635 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM38O00635 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM38O00635 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TRIM38O00635 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM38O00635 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM38O00635 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM38O00635 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.82■□□□□ 0.76
TRIM38O00635 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM38O00635 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM38O00635 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM38O00635 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TRIM38O00635 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.82■□□□□ 0.76
TRIM38O00635 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM38O00635 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.82■□□□□ 0.76
TRIM38O00635 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM38O00635 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM38O00635 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM38O00635 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TRIM38O00635 AC112907.3-201ENST00000577781 2400 ntBASIC19.82■□□□□ 0.76
TRIM38O00635 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
TRIM38O00635 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM38O00635 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM38O00635 AL512408.1-201ENST00000569378 2000 ntBASIC19.81■□□□□ 0.76
TRIM38O00635 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.81■□□□□ 0.76
TRIM38O00635 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM38O00635 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM38O00635 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM38O00635 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM38O00635 KRASP1-201ENST00000407852 552 ntBASIC19.81■□□□□ 0.76
TRIM38O00635 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
TRIM38O00635 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
TRIM38O00635 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM38O00635 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM38O00635 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM38O00635 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM38O00635 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM38O00635 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM38O00635 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TRIM38O00635 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM38O00635 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM38O00635 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM38O00635 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM38O00635 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM38O00635 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TRIM38O00635 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM38O00635 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TRIM38O00635 AL390719.1-204ENST00000412397 1219 ntBASIC19.8■□□□□ 0.76
TRIM38O00635 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM38O00635 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM38O00635 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.8■□□□□ 0.76
TRIM38O00635 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
TRIM38O00635 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TRIM38O00635 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.8■□□□□ 0.76
TRIM38O00635 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM38O00635 AC110285.5-201ENST00000611501 352 ntBASIC19.8■□□□□ 0.76
TRIM38O00635 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM38O00635 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TRIM38O00635 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM38O00635 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
TRIM38O00635 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM38O00635 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM38O00635 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM38O00635 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM38O00635 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM38O00635 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM38O00635 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM38O00635 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM38O00635 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TRIM38O00635 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM38O00635 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM38O00635 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TRIM38O00635 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM38O00635 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM38O00635 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms