Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.78■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.78■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.78■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 AP001271.2-201ENST00000624018 1556 ntBASIC19.78■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.77■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 AP005212.1-201ENST00000581547 1997 ntBASIC19.77■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.77■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.77■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.77■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.77■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.77■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.76■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.76■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.76■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.76■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.76■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.76■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.76■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.76■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.76■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.76■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.76■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.76■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.75■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.75■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.75■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 LINC01023-201ENST00000606054 436 ntBASIC19.75■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.75■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.75■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.74■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.74■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.74■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 TSPY15P-201ENST00000457163 923 ntBASIC19.74■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 AL445675.2-201ENST00000620291 557 ntBASIC19.74■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 AL031985.4-201ENST00000642138 673 ntBASIC19.74■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C1QTNF3-AMACRE9PGA6 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms