Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC53A6NM62 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC53A6NM62 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC53A6NM62 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC53A6NM62 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC53A6NM62 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.25■□□□□ 0.99
LRRC53A6NM62 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.25■□□□□ 0.99
LRRC53A6NM62 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
LRRC53A6NM62 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC53A6NM62 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.25■□□□□ 0.99
LRRC53A6NM62 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC53A6NM62 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
LRRC53A6NM62 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC53A6NM62 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC53A6NM62 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
LRRC53A6NM62 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.25■□□□□ 0.99
LRRC53A6NM62 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
LRRC53A6NM62 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC53A6NM62 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC53A6NM62 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.24■□□□□ 0.99
LRRC53A6NM62 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC53A6NM62 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC53A6NM62 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
LRRC53A6NM62 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
LRRC53A6NM62 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.24■□□□□ 0.99
LRRC53A6NM62 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC53A6NM62 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
LRRC53A6NM62 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC53A6NM62 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC53A6NM62 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.24■□□□□ 0.99
LRRC53A6NM62 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC53A6NM62 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC53A6NM62 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC53A6NM62 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
LRRC53A6NM62 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.24■□□□□ 0.99
LRRC53A6NM62 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC53A6NM62 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC53A6NM62 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC53A6NM62 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC53A6NM62 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
LRRC53A6NM62 AC004408.2-201ENST00000623613 2777 ntBASIC21.24■□□□□ 0.99
LRRC53A6NM62 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC53A6NM62 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.23■□□□□ 0.99
LRRC53A6NM62 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.23■□□□□ 0.99
LRRC53A6NM62 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC53A6NM62 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.23■□□□□ 0.99
LRRC53A6NM62 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC53A6NM62 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC53A6NM62 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC53A6NM62 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC53A6NM62 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
LRRC53A6NM62 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.23■□□□□ 0.99
LRRC53A6NM62 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC53A6NM62 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC53A6NM62 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.23■□□□□ 0.99
LRRC53A6NM62 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.23■□□□□ 0.99
LRRC53A6NM62 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC53A6NM62 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.23■□□□□ 0.99
LRRC53A6NM62 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC53A6NM62 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
LRRC53A6NM62 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
LRRC53A6NM62 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC53A6NM62 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
LRRC53A6NM62 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC53A6NM62 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.22■□□□□ 0.99
LRRC53A6NM62 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC53A6NM62 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
LRRC53A6NM62 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC53A6NM62 GPX1P1-201ENST00000388829 606 ntBASIC21.22■□□□□ 0.99
LRRC53A6NM62 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
LRRC53A6NM62 LSM12P1-201ENST00000411836 588 ntBASIC21.22■□□□□ 0.99
LRRC53A6NM62 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC53A6NM62 AC133552.2-202ENST00000575694 574 ntBASIC21.22■□□□□ 0.99
LRRC53A6NM62 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
LRRC53A6NM62 AC092437.1-201ENST00000624794 1048 ntBASIC21.22■□□□□ 0.99
LRRC53A6NM62 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.22■□□□□ 0.99
LRRC53A6NM62 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.22■□□□□ 0.99
LRRC53A6NM62 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC53A6NM62 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC53A6NM62 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC53A6NM62 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
LRRC53A6NM62 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
LRRC53A6NM62 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.22■□□□□ 0.99
LRRC53A6NM62 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC53A6NM62 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.21■□□□□ 0.99
LRRC53A6NM62 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC53A6NM62 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.21■□□□□ 0.99
LRRC53A6NM62 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
LRRC53A6NM62 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC53A6NM62 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.21■□□□□ 0.99
LRRC53A6NM62 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.21■□□□□ 0.99
LRRC53A6NM62 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC53A6NM62 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.21■□□□□ 0.99
LRRC53A6NM62 AL050303.2-201ENST00000619798 666 ntBASIC21.21■□□□□ 0.99
LRRC53A6NM62 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC53A6NM62 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.21■□□□□ 0.99
LRRC53A6NM62 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
LRRC53A6NM62 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
LRRC53A6NM62 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.2■□□□□ 0.98
LRRC53A6NM62 AC018553.1-201ENST00000616682 1458 ntBASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms