Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 KRT18P16-201ENST00000510337 1294 ntBASIC20.06■□□□□ 0.8
TBC1D3BA6NDS4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.06■□□□□ 0.8
TBC1D3BA6NDS4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.06■□□□□ 0.8
TBC1D3BA6NDS4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TBC1D3BA6NDS4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TBC1D3BA6NDS4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TBC1D3BA6NDS4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TBC1D3BA6NDS4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
TBC1D3BA6NDS4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TBC1D3BA6NDS4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.06■□□□□ 0.8
TBC1D3BA6NDS4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.05■□□□□ 0.8
TBC1D3BA6NDS4 FSCN1P1-201ENST00000568912 1481 ntBASIC20.05■□□□□ 0.8
TBC1D3BA6NDS4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.05■□□□□ 0.8
TBC1D3BA6NDS4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.05■□□□□ 0.8
TBC1D3BA6NDS4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.05■□□□□ 0.8
TBC1D3BA6NDS4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TBC1D3BA6NDS4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TBC1D3BA6NDS4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TBC1D3BA6NDS4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.05■□□□□ 0.8
TBC1D3BA6NDS4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TBC1D3BA6NDS4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TBC1D3BA6NDS4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TBC1D3BA6NDS4 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.05■□□□□ 0.8
TBC1D3BA6NDS4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TBC1D3BA6NDS4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.05■□□□□ 0.8
TBC1D3BA6NDS4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.05■□□□□ 0.8
TBC1D3BA6NDS4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.05■□□□□ 0.8
TBC1D3BA6NDS4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TBC1D3BA6NDS4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TBC1D3BA6NDS4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TBC1D3BA6NDS4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.05■□□□□ 0.8
TBC1D3BA6NDS4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.05■□□□□ 0.8
TBC1D3BA6NDS4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.04■□□□□ 0.8
TBC1D3BA6NDS4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TBC1D3BA6NDS4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
TBC1D3BA6NDS4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TBC1D3BA6NDS4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TBC1D3BA6NDS4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TBC1D3BA6NDS4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TBC1D3BA6NDS4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TBC1D3BA6NDS4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TBC1D3BA6NDS4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TBC1D3BA6NDS4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TBC1D3BA6NDS4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.04■□□□□ 0.8
TBC1D3BA6NDS4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TBC1D3BA6NDS4 RN7SL850P-201ENST00000579959 291 ntBASIC20.04■□□□□ 0.8
TBC1D3BA6NDS4 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.04■□□□□ 0.8
TBC1D3BA6NDS4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TBC1D3BA6NDS4 CYP2D8P-201ENST00000433633 1490 ntBASIC20.04■□□□□ 0.8
TBC1D3BA6NDS4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TBC1D3BA6NDS4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TBC1D3BA6NDS4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
TBC1D3BA6NDS4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TBC1D3BA6NDS4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.04■□□□□ 0.8
TBC1D3BA6NDS4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.03■□□□□ 0.8
TBC1D3BA6NDS4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TBC1D3BA6NDS4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TBC1D3BA6NDS4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TBC1D3BA6NDS4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TBC1D3BA6NDS4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TBC1D3BA6NDS4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TBC1D3BA6NDS4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.03■□□□□ 0.8
TBC1D3BA6NDS4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.03■□□□□ 0.8
TBC1D3BA6NDS4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TBC1D3BA6NDS4 AC026271.3-201ENST00000571884 352 ntBASIC20.03■□□□□ 0.8
TBC1D3BA6NDS4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.03■□□□□ 0.8
TBC1D3BA6NDS4 AC131212.4-201ENST00000623606 975 ntBASIC20.03■□□□□ 0.8
TBC1D3BA6NDS4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TBC1D3BA6NDS4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
TBC1D3BA6NDS4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TBC1D3BA6NDS4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TBC1D3BA6NDS4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TBC1D3BA6NDS4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.03■□□□□ 0.8
TBC1D3BA6NDS4 KRT18P22-201ENST00000402024 1347 ntBASIC20.02■□□□□ 0.8
TBC1D3BA6NDS4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TBC1D3BA6NDS4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TBC1D3BA6NDS4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TBC1D3BA6NDS4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TBC1D3BA6NDS4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TBC1D3BA6NDS4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TBC1D3BA6NDS4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TBC1D3BA6NDS4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.02■□□□□ 0.8
TBC1D3BA6NDS4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TBC1D3BA6NDS4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.02■□□□□ 0.8
TBC1D3BA6NDS4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.02■□□□□ 0.8
TBC1D3BA6NDS4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.02■□□□□ 0.8
TBC1D3BA6NDS4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TBC1D3BA6NDS4 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.02■□□□□ 0.8
TBC1D3BA6NDS4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TBC1D3BA6NDS4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TBC1D3BA6NDS4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.02■□□□□ 0.8
TBC1D3BA6NDS4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TBC1D3BA6NDS4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.02■□□□□ 0.79
TBC1D3BA6NDS4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TBC1D3BA6NDS4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TBC1D3BA6NDS4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
TBC1D3BA6NDS4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TBC1D3BA6NDS4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TBC1D3BA6NDS4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.01■□□□□ 0.79
TBC1D3BA6NDS4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms