Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SHISA3A0PJX4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHISA3A0PJX4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.2■□□□□ 0.34
SHISA3A0PJX4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHISA3A0PJX4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHISA3A0PJX4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SHISA3A0PJX4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHISA3A0PJX4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHISA3A0PJX4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.2■□□□□ 0.34
SHISA3A0PJX4 AC091305.1-201ENST00000479476 895 ntBASIC17.2■□□□□ 0.34
SHISA3A0PJX4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.2■□□□□ 0.34
SHISA3A0PJX4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.2■□□□□ 0.34
SHISA3A0PJX4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.2■□□□□ 0.34
SHISA3A0PJX4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.2■□□□□ 0.34
SHISA3A0PJX4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.2■□□□□ 0.34
SHISA3A0PJX4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.2■□□□□ 0.34
SHISA3A0PJX4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.2■□□□□ 0.34
SHISA3A0PJX4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHISA3A0PJX4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHISA3A0PJX4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHISA3A0PJX4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.2■□□□□ 0.34
SHISA3A0PJX4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHISA3A0PJX4 PCDHB18P-201ENST00000524813 2368 ntBASIC17.2■□□□□ 0.34
SHISA3A0PJX4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SHISA3A0PJX4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SHISA3A0PJX4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHISA3A0PJX4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SHISA3A0PJX4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SHISA3A0PJX4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SHISA3A0PJX4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHISA3A0PJX4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHISA3A0PJX4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHISA3A0PJX4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SHISA3A0PJX4 AC096631.2-201ENST00000436136 790 ntBASIC17.19■□□□□ 0.34
SHISA3A0PJX4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHISA3A0PJX4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
SHISA3A0PJX4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.19■□□□□ 0.34
SHISA3A0PJX4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.19■□□□□ 0.34
SHISA3A0PJX4 AL031432.3-201ENST00000607698 485 ntBASIC17.19■□□□□ 0.34
SHISA3A0PJX4 AL136967.2-201ENST00000623968 743 ntBASIC17.19■□□□□ 0.34
SHISA3A0PJX4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.19■□□□□ 0.34
SHISA3A0PJX4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.19■□□□□ 0.34
SHISA3A0PJX4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHISA3A0PJX4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SHISA3A0PJX4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHISA3A0PJX4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHISA3A0PJX4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHISA3A0PJX4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHISA3A0PJX4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.19■□□□□ 0.34
SHISA3A0PJX4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHISA3A0PJX4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHISA3A0PJX4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SHISA3A0PJX4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.19■□□□□ 0.34
SHISA3A0PJX4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHISA3A0PJX4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHISA3A0PJX4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SHISA3A0PJX4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.18■□□□□ 0.34
SHISA3A0PJX4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHISA3A0PJX4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SHISA3A0PJX4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SHISA3A0PJX4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SHISA3A0PJX4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHISA3A0PJX4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHISA3A0PJX4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHISA3A0PJX4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.18■□□□□ 0.34
SHISA3A0PJX4 KRT18P20-201ENST00000548986 1279 ntBASIC17.18■□□□□ 0.34
SHISA3A0PJX4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.18■□□□□ 0.34
SHISA3A0PJX4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
SHISA3A0PJX4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHISA3A0PJX4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SHISA3A0PJX4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.18■□□□□ 0.34
SHISA3A0PJX4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.18■□□□□ 0.34
SHISA3A0PJX4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.18■□□□□ 0.34
SHISA3A0PJX4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHISA3A0PJX4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.18■□□□□ 0.34
SHISA3A0PJX4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SHISA3A0PJX4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SHISA3A0PJX4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SHISA3A0PJX4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SHISA3A0PJX4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SHISA3A0PJX4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHISA3A0PJX4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SHISA3A0PJX4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHISA3A0PJX4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHISA3A0PJX4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHISA3A0PJX4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHISA3A0PJX4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHISA3A0PJX4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.17■□□□□ 0.34
SHISA3A0PJX4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.17■□□□□ 0.34
SHISA3A0PJX4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.17■□□□□ 0.34
SHISA3A0PJX4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.17■□□□□ 0.34
SHISA3A0PJX4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHISA3A0PJX4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SHISA3A0PJX4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHISA3A0PJX4 AC019069.1-201ENST00000610008 1333 ntBASIC17.17■□□□□ 0.34
SHISA3A0PJX4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHISA3A0PJX4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHISA3A0PJX4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SHISA3A0PJX4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHISA3A0PJX4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms