Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRDV1A0A1B0GX56 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.35■□□□□ 0.37
TRDV1A0A1B0GX56 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRDV1A0A1B0GX56 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRDV1A0A1B0GX56 CCDC92B-201ENST00000575506 885 ntBASIC17.35■□□□□ 0.37
TRDV1A0A1B0GX56 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRDV1A0A1B0GX56 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRDV1A0A1B0GX56 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.35■□□□□ 0.37
TRDV1A0A1B0GX56 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRDV1A0A1B0GX56 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRDV1A0A1B0GX56 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRDV1A0A1B0GX56 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TRDV1A0A1B0GX56 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRDV1A0A1B0GX56 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.35■□□□□ 0.37
TRDV1A0A1B0GX56 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRDV1A0A1B0GX56 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRDV1A0A1B0GX56 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRDV1A0A1B0GX56 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRDV1A0A1B0GX56 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TRDV1A0A1B0GX56 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRDV1A0A1B0GX56 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRDV1A0A1B0GX56 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRDV1A0A1B0GX56 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRDV1A0A1B0GX56 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRDV1A0A1B0GX56 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.34■□□□□ 0.37
TRDV1A0A1B0GX56 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.34■□□□□ 0.37
TRDV1A0A1B0GX56 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRDV1A0A1B0GX56 AC097381.1-201ENST00000429019 1296 ntBASIC17.34■□□□□ 0.37
TRDV1A0A1B0GX56 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRDV1A0A1B0GX56 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRDV1A0A1B0GX56 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TRDV1A0A1B0GX56 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.34■□□□□ 0.37
TRDV1A0A1B0GX56 AC087633.2-202ENST00000565166 1439 ntBASIC17.34■□□□□ 0.37
TRDV1A0A1B0GX56 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.34■□□□□ 0.37
TRDV1A0A1B0GX56 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.34■□□□□ 0.37
TRDV1A0A1B0GX56 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.34■□□□□ 0.37
TRDV1A0A1B0GX56 AC006333.2-201ENST00000607957 2099 ntBASIC17.34■□□□□ 0.37
TRDV1A0A1B0GX56 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.34■□□□□ 0.37
TRDV1A0A1B0GX56 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRDV1A0A1B0GX56 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRDV1A0A1B0GX56 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRDV1A0A1B0GX56 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRDV1A0A1B0GX56 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.33■□□□□ 0.37
TRDV1A0A1B0GX56 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRDV1A0A1B0GX56 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRDV1A0A1B0GX56 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRDV1A0A1B0GX56 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
TRDV1A0A1B0GX56 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRDV1A0A1B0GX56 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.33■□□□□ 0.37
TRDV1A0A1B0GX56 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRDV1A0A1B0GX56 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRDV1A0A1B0GX56 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
TRDV1A0A1B0GX56 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.33■□□□□ 0.36
TRDV1A0A1B0GX56 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TRDV1A0A1B0GX56 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.33■□□□□ 0.36
TRDV1A0A1B0GX56 CDV3P1-201ENST00000471403 739 ntBASIC17.33■□□□□ 0.36
TRDV1A0A1B0GX56 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.33■□□□□ 0.36
TRDV1A0A1B0GX56 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.33■□□□□ 0.36
TRDV1A0A1B0GX56 KRT18P20-201ENST00000548986 1279 ntBASIC17.33■□□□□ 0.36
TRDV1A0A1B0GX56 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.33■□□□□ 0.36
TRDV1A0A1B0GX56 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.33■□□□□ 0.36
TRDV1A0A1B0GX56 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.33■□□□□ 0.36
TRDV1A0A1B0GX56 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.33■□□□□ 0.36
TRDV1A0A1B0GX56 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.33■□□□□ 0.36
TRDV1A0A1B0GX56 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.33■□□□□ 0.36
TRDV1A0A1B0GX56 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRDV1A0A1B0GX56 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRDV1A0A1B0GX56 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRDV1A0A1B0GX56 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRDV1A0A1B0GX56 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRDV1A0A1B0GX56 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.33■□□□□ 0.36
TRDV1A0A1B0GX56 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRDV1A0A1B0GX56 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRDV1A0A1B0GX56 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRDV1A0A1B0GX56 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.32■□□□□ 0.36
TRDV1A0A1B0GX56 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRDV1A0A1B0GX56 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRDV1A0A1B0GX56 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRDV1A0A1B0GX56 AC005332.8-201ENST00000622750 2735 ntBASIC17.32■□□□□ 0.36
TRDV1A0A1B0GX56 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRDV1A0A1B0GX56 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.32■□□□□ 0.36
TRDV1A0A1B0GX56 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.32■□□□□ 0.36
TRDV1A0A1B0GX56 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.32■□□□□ 0.36
TRDV1A0A1B0GX56 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.32■□□□□ 0.36
TRDV1A0A1B0GX56 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.32■□□□□ 0.36
TRDV1A0A1B0GX56 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.32■□□□□ 0.36
TRDV1A0A1B0GX56 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.32■□□□□ 0.36
TRDV1A0A1B0GX56 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRDV1A0A1B0GX56 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRDV1A0A1B0GX56 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRDV1A0A1B0GX56 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRDV1A0A1B0GX56 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRDV1A0A1B0GX56 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRDV1A0A1B0GX56 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.32■□□□□ 0.36
TRDV1A0A1B0GX56 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRDV1A0A1B0GX56 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
TRDV1A0A1B0GX56 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRDV1A0A1B0GX56 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
TRDV1A0A1B0GX56 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRDV1A0A1B0GX56 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms