Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV17A0A0B4J275 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAV17A0A0B4J275 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TRAV17A0A0B4J275 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV17A0A0B4J275 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.88■□□□□ 0.45
TRAV17A0A0B4J275 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV17A0A0B4J275 AC097488.1-201ENST00000507834 756 ntBASIC17.88■□□□□ 0.45
TRAV17A0A0B4J275 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.88■□□□□ 0.45
TRAV17A0A0B4J275 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV17A0A0B4J275 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAV17A0A0B4J275 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAV17A0A0B4J275 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV17A0A0B4J275 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV17A0A0B4J275 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV17A0A0B4J275 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV17A0A0B4J275 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV17A0A0B4J275 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.88■□□□□ 0.45
TRAV17A0A0B4J275 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.88■□□□□ 0.45
TRAV17A0A0B4J275 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAV17A0A0B4J275 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAV17A0A0B4J275 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV17A0A0B4J275 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
TRAV17A0A0B4J275 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV17A0A0B4J275 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TRAV17A0A0B4J275 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV17A0A0B4J275 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
TRAV17A0A0B4J275 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV17A0A0B4J275 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV17A0A0B4J275 TERF1P1-201ENST00000311003 1181 ntBASIC17.87■□□□□ 0.45
TRAV17A0A0B4J275 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TRAV17A0A0B4J275 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.87■□□□□ 0.45
TRAV17A0A0B4J275 AC011506.1-201ENST00000474329 610 ntBASIC17.87■□□□□ 0.45
TRAV17A0A0B4J275 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TRAV17A0A0B4J275 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.87■□□□□ 0.45
TRAV17A0A0B4J275 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV17A0A0B4J275 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV17A0A0B4J275 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.87■□□□□ 0.45
TRAV17A0A0B4J275 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV17A0A0B4J275 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.86■□□□□ 0.45
TRAV17A0A0B4J275 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TRAV17A0A0B4J275 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV17A0A0B4J275 ARMC10P1-201ENST00000313754 855 ntBASIC17.86■□□□□ 0.45
TRAV17A0A0B4J275 KRT18P57-201ENST00000443599 1254 ntBASIC17.86■□□□□ 0.45
TRAV17A0A0B4J275 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV17A0A0B4J275 KRT18P35-201ENST00000510488 1269 ntBASIC17.86■□□□□ 0.45
TRAV17A0A0B4J275 EGLN1P1-201ENST00000531623 762 ntBASIC17.86■□□□□ 0.45
TRAV17A0A0B4J275 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.86■□□□□ 0.45
TRAV17A0A0B4J275 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.86■□□□□ 0.45
TRAV17A0A0B4J275 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
TRAV17A0A0B4J275 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV17A0A0B4J275 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV17A0A0B4J275 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV17A0A0B4J275 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV17A0A0B4J275 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV17A0A0B4J275 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV17A0A0B4J275 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV17A0A0B4J275 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.85■□□□□ 0.45
TRAV17A0A0B4J275 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV17A0A0B4J275 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
TRAV17A0A0B4J275 CRYGFP-201ENST00000418459 633 ntBASIC17.85■□□□□ 0.45
TRAV17A0A0B4J275 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV17A0A0B4J275 LIN28AP1-201ENST00000429574 405 ntBASIC17.85■□□□□ 0.45
TRAV17A0A0B4J275 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.85■□□□□ 0.45
TRAV17A0A0B4J275 AC128688.1-201ENST00000487626 519 ntBASIC17.85■□□□□ 0.45
TRAV17A0A0B4J275 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.85■□□□□ 0.45
TRAV17A0A0B4J275 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV17A0A0B4J275 SMG8-203ENST00000578922 2178 ntBASIC17.85■□□□□ 0.45
TRAV17A0A0B4J275 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.85■□□□□ 0.45
TRAV17A0A0B4J275 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.85■□□□□ 0.45
TRAV17A0A0B4J275 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV17A0A0B4J275 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV17A0A0B4J275 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV17A0A0B4J275 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV17A0A0B4J275 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV17A0A0B4J275 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TRAV17A0A0B4J275 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAV17A0A0B4J275 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRAV17A0A0B4J275 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV17A0A0B4J275 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TRAV17A0A0B4J275 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV17A0A0B4J275 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV17A0A0B4J275 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV17A0A0B4J275 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV17A0A0B4J275 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV17A0A0B4J275 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV17A0A0B4J275 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV17A0A0B4J275 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV17A0A0B4J275 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV17A0A0B4J275 TSPY14P-201ENST00000303979 915 ntBASIC17.84■□□□□ 0.45
TRAV17A0A0B4J275 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV17A0A0B4J275 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAV17A0A0B4J275 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.84■□□□□ 0.45
TRAV17A0A0B4J275 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.84■□□□□ 0.45
TRAV17A0A0B4J275 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.84■□□□□ 0.45
TRAV17A0A0B4J275 AC130371.2-201ENST00000619443 611 ntBASIC17.84■□□□□ 0.45
TRAV17A0A0B4J275 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRAV17A0A0B4J275 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV17A0A0B4J275 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV17A0A0B4J275 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
TRAV17A0A0B4J275 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms