Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 PWWP2AP1-201ENST00000429776 2273 ntBASIC13.73□□□□□ -0.21
TRBV6-8A0A0A6YYG3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV6-8A0A0A6YYG3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV6-8A0A0A6YYG3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-8A0A0A6YYG3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-8A0A0A6YYG3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-8A0A0A6YYG3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-8A0A0A6YYG3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
TRBV6-8A0A0A6YYG3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TRBV6-8A0A0A6YYG3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-8A0A0A6YYG3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV6-8A0A0A6YYG3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
TRBV6-8A0A0A6YYG3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC13.72□□□□□ -0.21
TRBV6-8A0A0A6YYG3 AC105036.2-201ENST00000569468 176 ntBASIC13.72□□□□□ -0.21
TRBV6-8A0A0A6YYG3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-8A0A0A6YYG3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-8A0A0A6YYG3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV6-8A0A0A6YYG3 AC092437.1-201ENST00000624794 1048 ntBASIC13.72□□□□□ -0.21
TRBV6-8A0A0A6YYG3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC13.72□□□□□ -0.21
TRBV6-8A0A0A6YYG3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC13.72□□□□□ -0.21
TRBV6-8A0A0A6YYG3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-8A0A0A6YYG3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-8A0A0A6YYG3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-8A0A0A6YYG3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-8A0A0A6YYG3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-8A0A0A6YYG3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TRBV6-8A0A0A6YYG3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
TRBV6-8A0A0A6YYG3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-8A0A0A6YYG3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-8A0A0A6YYG3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC13.72□□□□□ -0.21
TRBV6-8A0A0A6YYG3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV6-8A0A0A6YYG3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-8A0A0A6YYG3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-8A0A0A6YYG3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-8A0A0A6YYG3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-8A0A0A6YYG3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-8A0A0A6YYG3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC13.71□□□□□ -0.21
TRBV6-8A0A0A6YYG3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-8A0A0A6YYG3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
TRBV6-8A0A0A6YYG3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-8A0A0A6YYG3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC13.71□□□□□ -0.21
TRBV6-8A0A0A6YYG3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-8A0A0A6YYG3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC13.71□□□□□ -0.21
TRBV6-8A0A0A6YYG3 SERPINH1P1-201ENST00000419794 1249 ntBASIC13.71□□□□□ -0.21
TRBV6-8A0A0A6YYG3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC13.71□□□□□ -0.21
TRBV6-8A0A0A6YYG3 AC026185.1-201ENST00000445748 174 ntBASIC13.71□□□□□ -0.21
TRBV6-8A0A0A6YYG3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC13.71□□□□□ -0.21
TRBV6-8A0A0A6YYG3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-8A0A0A6YYG3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC13.71□□□□□ -0.21
TRBV6-8A0A0A6YYG3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-8A0A0A6YYG3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-8A0A0A6YYG3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-8A0A0A6YYG3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-8A0A0A6YYG3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-8A0A0A6YYG3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRBV6-8A0A0A6YYG3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TRBV6-8A0A0A6YYG3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRBV6-8A0A0A6YYG3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRBV6-8A0A0A6YYG3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRBV6-8A0A0A6YYG3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRBV6-8A0A0A6YYG3 AC093484.2-201ENST00000580996 2166 ntBASIC13.71□□□□□ -0.22
TRBV6-8A0A0A6YYG3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC13.71□□□□□ -0.22
TRBV6-8A0A0A6YYG3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TRBV6-8A0A0A6YYG3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
TRBV6-8A0A0A6YYG3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
TRBV6-8A0A0A6YYG3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-8A0A0A6YYG3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
TRBV6-8A0A0A6YYG3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TRBV6-8A0A0A6YYG3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-8A0A0A6YYG3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
TRBV6-8A0A0A6YYG3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC13.7□□□□□ -0.22
TRBV6-8A0A0A6YYG3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-8A0A0A6YYG3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-8A0A0A6YYG3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC13.7□□□□□ -0.22
TRBV6-8A0A0A6YYG3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-8A0A0A6YYG3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC13.7□□□□□ -0.22
TRBV6-8A0A0A6YYG3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC13.7□□□□□ -0.22
TRBV6-8A0A0A6YYG3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-8A0A0A6YYG3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TRBV6-8A0A0A6YYG3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-8A0A0A6YYG3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-8A0A0A6YYG3 CDCA4P2-201ENST00000441182 718 ntBASIC13.7□□□□□ -0.22
TRBV6-8A0A0A6YYG3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC13.7□□□□□ -0.22
TRBV6-8A0A0A6YYG3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC13.7□□□□□ -0.22
TRBV6-8A0A0A6YYG3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC13.7□□□□□ -0.22
TRBV6-8A0A0A6YYG3 IKBKGP1-201ENST00000612193 1073 ntBASIC13.7□□□□□ -0.22
TRBV6-8A0A0A6YYG3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC13.7□□□□□ -0.22
TRBV6-8A0A0A6YYG3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-8A0A0A6YYG3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-8A0A0A6YYG3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-8A0A0A6YYG3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-8A0A0A6YYG3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TRBV6-8A0A0A6YYG3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TRBV6-8A0A0A6YYG3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 AC005332.7-201ENST00000614046 2005 ntBASIC13.69□□□□□ -0.22
TRBV6-8A0A0A6YYG3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms